Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0962 ATGGCCGAAAACGCATTCATCAACAGGAAGCGCAGCGGCGCCCTCGACGTCATTGCGGACGGCGATCCTAAGAGGAAGAACGCGGCACGCGACATGGACCCCGCCGCCGCATTGGCCCTCACGCGTCATGAGTTCGGGGAGCACGGCGGCGTCAACATGTCCATAGAGGCCTCCGCCACGTTCACGGTCATGGAGCCGGAGACCCTCCGCCGAATGTTCGCTGGTGAGCTGGGCCCTGACCGCGACTTCTTCATCTACAGCCGCCACTTCAACCCGACAGTGCTGAAACTTGGCCGCCTGATGGCAGCCATGGAAGGCACCGAGGCCGCCTACTGCACCGCCAGCGGCATGTCCGCCATCTCCTCGGTGCTCTTCCAGCTGTGCAGCTCCGGCGGACACGTTGTGGCGTCCAACACGCTCTACGGCGGAACCCACGCCCTGCTCTCGCATTTCTTCCCCAGGACATCCAACATCAACACGACCTTCGTGGACATAGACGATTTGGAGAGCGTGGAGAGCGCCATCGTGGAAGGGAAGACGAAGGTGCTGTACTTCGAGTCCGTGGCCAATCCCAGCCTGAAGGTGGCCAACATTCCCGAACTCTGCCGCGTGGGACACGCGAAGGGCCTGACCGTGGTGGTGGACAACACCTTCGCTCCCATGGTGATCTCTCCCGCCCGTCTCGGCGCTGACGTGGTGGTTCACAGCATCTCGAAGTTTATCAGCGGCGGTGCTGACATTATTGCAGGGGCTGTGTGCGGACCGGCGAGTCTGGTGAATTCGATGATGGACCTTCACCAAGGGGCTCTGATGCTGCTGGGTCCGACGATGAACGCGAAGGTGGCGTTCGAATTGTCGGAGAGAATTCCTCACCTGGGCCTTCGGATGAAGGAGCACAGCCACAGAGCGTTGGTGTTCGCGACGAGGCTGAAGAAACTGGGAGTGAAGGTGATCTACCCAGGACTGGAAGAGCACCCGCAGCACCAACTCCTGAAATCAATGGCCAACATGGAGTACGGGTACGGGGGGCTTCTCTGCATAGACATGGAAACGGTGGATAGGGCTAACCAGTTGATGAGTCAGCTGCAAAACGATGTTCAGTTTGGATTCATGGCCGTGAGCCTGGGGTATTACGAGACCCTCATGTCCTGCTCCGGAAGCAGCACTAGCAGTGAGATGACTGCGGAGGAACAGAAGCTTGCCGGCATCTCCCCAGGCCTCATCCGGATGTCTATTGGATACATTGGCACTTTGGATCAGAAATGGTCTCAGATGGAAACGGCACTCACTAGATTCATCCACCCCATGCCTTAG 1314 0.5898 MAENAFINRKRSGALDVIADGDPKRKNAARDMDPAAALALTRHEFGEHGGVNMSIEASATFTVMEPETLRRMFAGELGPDRDFFIYSRHFNPTVLKLGRLMAAMEGTEAAYCTASGMSAISSVLFQLCSSGGHVVASNTLYGGTHALLSHFFPRTSNINTTFVDIDDLESVESAIVEGKTKVLYFESVANPSLKVANIPELCRVGHAKGLTVVVDNTFAPMVISPARLGADVVVHSISKFISGGADIIAGAVCGPASLVNSMMDLHQGALMLLGPTMNAKVAFELSERIPHLGLRMKEHSHRALVFATRLKKLGVKVIYPGLEEHPQHQLLKSMANMEYGYGGLLCIDMETVDRANQLMSQLQNDVQFGFMAVSLGYYETLMSCSGSSTSSEMTAEEQKLAGISPGLIRMSIGYIGTLDQKWSQMETALTRFIHPMP* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0962 437 Pfam Cys/Met metabolism PLP-dependent enzyme 47 414 IPR000277 GO:0019346|GO:0030170
Pvu4g0962 437 Gene3D - 36 289 IPR015421 GO:0003824
Pvu4g0962 437 SUPERFAMILY PLP-dependent transferases 45 420 IPR015424 -
Pvu4g0962 437 PIRSF CGS 21 432 IPR000277 GO:0019346|GO:0030170
Pvu4g0962 437 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 26 431 IPR000277 GO:0019346|GO:0030170
Pvu4g0962 437 PANTHER METHIONINE GAMMA-LYASE-LIKE 26 431 - -
Pvu4g0962 437 Gene3D Aspartate Aminotransferase, domain 1 293 434 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0962 Pvu-Chr4 21657733 21659478 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0962 K01761 - gmx:100781016 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0846 1 13600110 13604553 Pvu4g0962 4 21657733 21659478 PCT