Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0846 ATGGGCGACACGTACGTTTTGGCCACTCAGAAGCGCAACCGCTCCGACGATGCCGACGCCGGTGACTCCAAGAAGCTCATGCTACATGCCGAGGCGGATCCGGCGGCGGCGCTGGCCAGCGCGCGCCACGAGTTCGGGGAGCACGGTGGAGTGAACATGTCCATCGAGGCATCTGCGACCTTCACGGTGATGGAGCCGGAGACGATGCAACGCATGTTCAACGGCGAACTTGGCCCTGACCGCGACTTCTTCATCTACAGTCGCCACTTCAACCCGACGGTGCTGAACCTGAGCCGCCTTATGGCCGCACTGGAGGGCACAGAGGCGGCGTACTGCACCGCGAGCGGGATGTCGGCGATTACCGCTGTGCTGTTGCAGCTGTGCAGCCACGGGGAACACATGGTGGCGTCAAGAACGTTGTACGGCGGGACCCACGCACTGCTGTCGCACTTCTTTCCACGCACGTGCGGGATAATAACAAGCTTCGTGGAGGTGACGGATCTTGAGATGGTGGATGACGCGATGGTGGAGGGGAAAACAAAAGTGCTTTACTTCGAATCGATTTCAAACCCGACTCTGACGGTGGCGAACATACCGGAGCTGTGCCGTATAGCGCACCGGAAGGGGGTGACGGTGGTGGTAGACAACACGTTCGCGCCTATGGTGCTTTCCCCGGCGCGTCTGGGTGCTGATGTGGTGGTTCACAGTATCTCCAAGTTCATCAGCGGTGGGGCCGATATAATCGCAGGGGCTGTGTGTGGGCCTGAAAGCCTGGTGAACAAGATGATGGACCTGCAACAAGGGGCCTTGATGCTCTTGGGCCCTACGATGAACCCAAAGGTGGCATTCGAACTTTCAGAGAGAATCCCGCACCTTGGGCTAAGAATGAAGGAGCACAGTCAGCGGTCCTTAGTGTTCGCAAGGAGGCTGAAAAGCATGGGCCTGAGGGTGATCTACCCGGGCCTGGAGGAGCACCCACAGCACCAGTTACTGAAGTCGATGCATAACGCTGAGTACGGGTTCGGTGGGCTTATCTGCGTGGATATGGAGACTGAGGAGAGGGCGAATCGGTTGATGAACCACTTGCAGAACTATGGGCAGTTTGGGTTCATGGCGGTGAGCTTGGGGTACTATGAGACTCTCATGTCATGCTCTGGAAGTAGCACAAGCAGTGAGTTGAACTCTGAGGAAAAGAAGCTGGCTGGAATTTCACCTGGGCTTGTGAGAATGTCCATTGGGTACATTGGCACCTTGGAACAGAAATGGGCCCAGCTCGACAAGGCCCTAACTAGGCTTCAGGAGCCTCCCTTTAAGAATTGA 1320 0.5712 MGDTYVLATQKRNRSDDADAGDSKKLMLHAEADPAAALASARHEFGEHGGVNMSIEASATFTVMEPETMQRMFNGELGPDRDFFIYSRHFNPTVLNLSRLMAALEGTEAAYCTASGMSAITAVLLQLCSHGEHMVASRTLYGGTHALLSHFFPRTCGIITSFVEVTDLEMVDDAMVEGKTKVLYFESISNPTLTVANIPELCRIAHRKGVTVVVDNTFAPMVLSPARLGADVVVHSISKFISGGADIIAGAVCGPESLVNKMMDLQQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHSQRSLVFARRLKSMGLRVIYPGLEEHPQHQLLKSMHNAEYGFGGLICVDMETEERANRLMNHLQNYGQFGFMAVSLGYYETLMSCSGSSTSSELNSEEKKLAGISPGLVRMSIGYIGTLEQKWAQLDKALTRLQEPPFKN* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0846 439 PIRSF CGS 21 433 IPR000277 GO:0019346|GO:0030170
Pvu1g0846 439 PANTHER METHIONINE GAMMA-LYASE-LIKE 10 433 - -
Pvu1g0846 439 SUPERFAMILY PLP-dependent transferases 46 429 IPR015424 -
Pvu1g0846 439 Pfam Cys/Met metabolism PLP-dependent enzyme 46 414 IPR000277 GO:0019346|GO:0030170
Pvu1g0846 439 Gene3D Aspartate Aminotransferase, domain 1 293 432 IPR015422 GO:0003824
Pvu1g0846 439 MobiDBLite consensus disorder prediction 1 21 - -
Pvu1g0846 439 Gene3D - 35 289 IPR015421 GO:0003824
Pvu1g0846 439 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 10 433 IPR000277 GO:0019346|GO:0030170
Pvu1g0846 439 CDD CGS_like 49 429 IPR000277 GO:0019346|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0846 Pvu-Chr1 13600110 13604553 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0846 K01761 - gmx:100808736 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0846 1 13600110 13604553 Pvu4g0962 4 21657733 21659478 PCT