Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0847 ATGGGAAAAGGGTGGTTTTTGAGATGGGTTTTTGTAGTGATTGGGGTGATGGGTTGGTGGGGTGTGGAAGGGCTTGGGGTGAACTGGGGGACTCAAGCCACACACCAGTTGAGAGCAGACACTGTGGTTGAGATGTTGAAGGACAATGGGATTCAAAAGGTGAAGCTGTTTGATGCAGATGAGTCTAGCATGAGTGCTCTATCTGGGTCAGGGATTGAAACCATGGTTGCCATTCCCAATAACCAACTTTCTGAGATGAATGACTATGATCGTGCCATGCAGTGGGTGAAGAAAAATGTCACAAGTTACAACTTCAGGGGTGGAGTTAACATCAAGTATGTAGCAGTTGGGAACGAGCCATTTTTGAGATCCTACAATGGTTCATTCATGAAAGTCACCTTCCCTGCATTACAGAACATTCAAAATGCCCTGAATGAAGTTGGTGTAGGAGACTCCATAAAAGCCACAGTGCCCTTAAACGCTGATGTGTATGAGTCTCCAATAAACAACCCTGTTCCATCAGCTGGAATGTTTAGGCCTGATATAAGTGAGCTAATGATTCAAATTGTGCAATTTTTGGCCAAGAACAATGCACCATTCACAGTGAACATTTACCCCTTCTTGAGCCTCTATGGGAATGACAATTTCCCTTTTGACTATGCCTTCTTTGATGGGGTGGCCAATCCCATAAATGATAATGGGGTTTCATACACCAATGTCTTTGATGCAAACTTTGACACCTTGGTCTCTGCCCTCCAAAAAGTGGGGTATGGGGACATGCCAATTTTGGTAGGAGAGGTAGGATGGCCAACAGATGGGGACAAAAATGCCAATGTAGGCAATGCTTTTAGGTTCTACAATGGGCTTCTACCAAGGCTTGCACTGAATAAAGGGACCCCACTTAAGCCAAAATATATTGAAGTTTATCTTTTTGGGCTCATTGATGAAGATGCCAAAAGCATTGACCCAGGGAACTTTGAGCGCCATTGGGGAATTTTTAAGTATGATGGAAAGCCTAAGTTTCCAATGGACCTTTCTGGAAAAGGCCCAAAAAAGCTACTAGTTGGTGCTCAAAATGTGCACTATCTTGATCCAAAGTGGTGCATGTTCAACCCTGAGACACAGGACATAAGCAAACTTGCTGATAACATAAATTATGCTTGCACACTTGCTGATTGCACTGCTCTTGGATATGGATCTTCTTGCAACAACTTGGATGCAAATGGGAATGCCTCATATGCCTTTAACATGTATTACCAGACACAGGATCAGAATGACTTGGCCTGCAATTTTGAAGGTTTGGCAAGGCTTACAACAACCAACATTTCAACACCATCTTGCAACTTTATTCTTCAGATCAATCCTTCCCTATCCCCTTCTCTCAGGCCCCCAATAGTAGCTTTCTTATCTATCACTCTACCCTTGATTTTAATGTTGTAG 1440 0.4319 MGKGWFLRWVFVVIGVMGWWGVEGLGVNWGTQATHQLRADTVVEMLKDNGIQKVKLFDADESSMSALSGSGIETMVAIPNNQLSEMNDYDRAMQWVKKNVTSYNFRGGVNIKYVAVGNEPFLRSYNGSFMKVTFPALQNIQNALNEVGVGDSIKATVPLNADVYESPINNPVPSAGMFRPDISELMIQIVQFLAKNNAPFTVNIYPFLSLYGNDNFPFDYAFFDGVANPINDNGVSYTNVFDANFDTLVSALQKVGYGDMPILVGEVGWPTDGDKNANVGNAFRFYNGLLPRLALNKGTPLKPKYIEVYLFGLIDEDAKSIDPGNFERHWGIFKYDGKPKFPMDLSGKGPKKLLVGAQNVHYLDPKWCMFNPETQDISKLADNINYACTLADCTALGYGSSCNNLDANGNASYAFNMYYQTQDQNDLACNFEGLARLTTTNISTPSCNFILQINPSLSPSLRPPIVAFLSITLPLILML* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0847 479 Pfam X8 domain 366 435 IPR012946 -
Pvu4g0847 479 Gene3D - 363 456 - -
Pvu4g0847 479 Gene3D Glycosidases 24 351 - -
Pvu4g0847 479 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 3 456 IPR044965 GO:0004553|GO:0005975
Pvu4g0847 479 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Pvu4g0847 479 PANTHER GLYCOSIDE HYDROLASE, FAMILY 17, X8 3 456 - -
Pvu4g0847 479 SUPERFAMILY (Trans)glycosidases 25 344 IPR017853 -
Pvu4g0847 479 SMART X8_cls 366 449 IPR012946 -
Pvu4g0847 479 Pfam Glycosyl hydrolases family 17 25 344 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0847 Pvu-Chr4 13449355 13452041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0847 12 453 Miscellaneous Gene Families AT1G64760 73.529 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0847 - - gmx:102666963 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1136 1 29789558 29793258 Pvu4g0847 4 13449355 13452041 PCT