Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1136 ATGGAAGAAAACTGGGTTTTGAGATGGGTGTTGGTGGTGGGGGTGATGTGTTGGTGTGGGGAAGGGATTGGTGTGAATTGGGGAACCCAAGCAACGCATAAGTTGCCACCAGACACAGTGGTTCAGTTGTTGAAGGACAATGGGATTCAGAAAGTGAAGCTTTTTGATGCAGATGACTCCACCATGAGTGCCTTGGCTGGGACTGGGATTGAAGTAATGGTGGCTATCCCTAATATCCAGCTTCTTGAGATGAATGACTTTGGCAGGGCCAAACAGTGGGTTAAGAAAAACGTCACGCGTTACACCTTCAATGGGGGTGTTAACATCAAGTATGTAGCAGTTGGGAACGAGCCATTTTTGAAATCCTACAACAATTCATTCTTGAATATCACCTTTCCTGCTCTGCAGAACATTCAAAATGCCCTTAACGATGCAGGTGTTGGAGACACAATAAAGGCTACAGTACCCTTGAATGCAGATGTGTATCAGTCTCCAGAGAACAATCCTGTTCCATCTGCAGGAATATTCAGGCCTGATATCACTGGTCTCATGACCCAGATAGTGCAATTTCTCAGCAAGAATGGTGCACCATTTACTGTGAACATTTACCCCTTCTTAAGTCTTTATGGAAACGATGATTTTCCTTTCAACTACGCCTTCTTTGACGGCGTAGACAATCCAGTAAATGATAATGGTACTCCATACACCAATGTCTTTGATGCAAATTTTGATACCTTGGTTGCAGCTCTCAAATCAGTGGGGTTTGGAGACCTGCCTATTTTGGTGGGGGAAGTAGGATGGCCAACAGAAGGAGACAAGAATGCCAATGTTGGCAATGCTTTGAGGTTCTACAATGGCCTTCTGCCAAGGCTTGCAGGCAACAGAGGCACGCCGTGCCGCCCAGGACACATTGAAGTTTATCTTTTTGGACTCATTGATGAGGATGCCAAGAGCATTGCTCCAGGAAACTTTGAACGTCACTGGGGAATATTCAGATATGATGGACAACCCAAGTTTCCAATGGACCTTTCTGGTCAGAACCAAAACAAATTTCTCATAGGTGCACAGAATGTGAAGTACCTTGCTCCAAGGTGGTGCATGTTTAATCCTAATGCTAAGGATCTAACCAGCCTTCCAGATAACATCAACTATGCCTGTACCTTTGGAGATTGCACAGCACTTGGATACGGATCCTCTTGTAACAACCTTGATGCTAATGGCAATGCCTCTTATGCCTTTAATATGTACTTCCAGGTGCAAAATCAGAACCCCATGGCCTGCAATTTTCAAGGTTTGGCCAAAATTACTACGGACAATATCTCAACACCCACTTGCAATTTTATCATTCAGATAGTTAGTTCTTCAGTCTCTTCTTTGATTCCCTCACTTGTTGCTTTCTTGTTTGTTAGTTTATTCATGATCCTGTTTTGGTAG 1434 0.4386 MEENWVLRWVLVVGVMCWCGEGIGVNWGTQATHKLPPDTVVQLLKDNGIQKVKLFDADDSTMSALAGTGIEVMVAIPNIQLLEMNDFGRAKQWVKKNVTRYTFNGGVNIKYVAVGNEPFLKSYNNSFLNITFPALQNIQNALNDAGVGDTIKATVPLNADVYQSPENNPVPSAGIFRPDITGLMTQIVQFLSKNGAPFTVNIYPFLSLYGNDDFPFNYAFFDGVDNPVNDNGTPYTNVFDANFDTLVAALKSVGFGDLPILVGEVGWPTEGDKNANVGNALRFYNGLLPRLAGNRGTPCRPGHIEVYLFGLIDEDAKSIAPGNFERHWGIFRYDGQPKFPMDLSGQNQNKFLIGAQNVKYLAPRWCMFNPNAKDLTSLPDNINYACTFGDCTALGYGSSCNNLDANGNASYAFNMYFQVQNQNPMACNFQGLAKITTDNISTPTCNFIIQIVSSSVSSLIPSLVAFLFVSLFMILFW* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1136 477 Gene3D Glycosidases 21 351 - -
Pvu1g1136 477 Pfam Glycosyl hydrolases family 17 23 342 IPR000490 GO:0004553|GO:0005975
Pvu1g1136 477 Pfam X8 domain 365 433 IPR012946 -
Pvu1g1136 477 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 2 464 IPR044965 GO:0004553|GO:0005975
Pvu1g1136 477 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Pvu1g1136 477 Gene3D - 361 459 - -
Pvu1g1136 477 SMART X8_cls 364 447 IPR012946 -
Pvu1g1136 477 PANTHER GLYCOSIDE HYDROLASE, FAMILY 17, X8 2 464 - -
Pvu1g1136 477 SUPERFAMILY (Trans)glycosidases 23 342 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1136 Pvu-Chr1 29789558 29793258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1136 6 453 Miscellaneous Gene Families AT1G64760 75.223 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1136 - - gmx:100815300 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1136 1 29789558 29793258 Pvu1g1136 1 29789558 29793258 ECH
Pvu1g1136 1 29789558 29793258 Pvu4g0847 4 13449355 13452041 PCT