Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0846 GTTAGTGCCTCGTATGAGCAAGCTCTAGTGGATTCACGCAAGCTTATTGAGCGTGAAATGGAAAGATTCAAGATCTGTGAGAAGGAGACAAAGACAAAAGCATTCTCTAAAGAAGGCTTAGGTCAACAGCCCAAAACTGATCCTAGAGGGAAGGCTAAATCAGAGACAAGGGATTGGTTGAACAATGTGGTTGCGGAATTAGAATCTCACATCGATAACTTTGAAGCTGAGCTTGAAGGACTTTCAGTAAAAAAAGGAAAGAGCAAGCCACCCAGATTGATACATCTAGAAACATCAATTACTCGGCACAAGGCTCACGTAAAGAAATGTGAGTTTATCTTGAGGCTACTAGATAATGATGAACTAAGTCCAGAGCAGGTGAATGATGTCAAAGATTTCTTGGATGACTATATAGAGCGTAATCAGGAGGACTTTGAAGAATTTAATGATGTTGATGAGTTATATAGTTCATTACCCCTAGATAAGGTGGACTCACCGGAAGATATTGTAACAATTCCCCCTGGTCTTGCTAAGGTGGCACCTGTGCTTAGCTTGAAGCCTTTGGCAACATCAGCTTCAGCATCACAAACATCTGAGCAAGCCGATGATACAGCTTCTCAGGATAGCAATTCTGATGTTGGTGCAAGAACTCCACCTCCTAAAAGTAGTACAGTTAGTTCTACTGCTACAACACCAGCAGGGAGTTTTGCTACTCCTGTTTCTATAAATGTTCCAGTGCCTAACTTGTCAAGTCCACCAGCCATTTCTTCAGTGACACCTGGTTCAAATTCTGTTCGGAGTTCCTTGGAAATTAGTAGTGCCGTCACTGCTTCACCTTTTGTAAATCAGTCTAGCACTATGAAAGAGGAAGAGATTAATAGTTTCCCTGGCCGAAGACCATCTCCATCACTTTCAGATGTTGCACTCATAAGGAATATCAGCAGAAACAGTCTATCAAATCAAACAACAAATAGCATACCTCTTGTTTCTGGAAACATGGTTTCCAGCAATGGGCCTCTTGGTTCAGTTTCTTCAGCTTCTGAAATAACCAAGAGAAACATATTGGTTGCTGATGATAGACTCGGAAGCAATGGGATGGTGTCGGCTCTTGTATCCCCTTTAAGTAATAGAATGATTATGCCTCAGGTTGCAAGGGCTAGTGATGGAACTTCCTCAGTTGACTCTAGTAATGCCGGCGAAGGTGCAACTGTGTCTGGGAGAGTTTTCTCCCCTTCTGCTATTCCTGGCATGCAATGGAGACCTGGAAGTCCCTTCCAGAATCAGAATGATGTGGGTCATGTTCGTGCAAGAACTGAAATAGTTCCTGATCAAAGGGAAAGATATTTACAGAAGTTCCAGCAAGTGCAACAACAAGGCCAAAGTGCCCTTCTTAATATGCCATCTTTTCCAGGAGGGAATCCCAAGCAGTTTTCTTCTCAGCAGCAAAATCCTCTCTTCCAGCAGTTCAATTCTCAGTCTGGTGTGGGACTTGGACTCCAGTCATCAGGTCTTAGTGGTATTTCTTCCACCTCATTACCCCAGCCATCCATTTCTATCCATTCCCCATCTAGCCAACAATCATTGCTGTCAGTTGTTTCTAAAGATCCAGATGTTGGCAATTCTAAGGTTGACGAGTCACAGCAACAGATTTTTCCTGATGATTCGGGGACTGAATCTACTGCTAGTACTGGAATTAGCAAGAATTTTATGAATGAAGATGAACTGAAATCCACGTATGCTGTAGACTCTCCGGCAGGAGGAGTACCTACCTCTCTTCCAGAGCCTGTTCAGACTTCTAGAGATATTGATTTGTCTCCCAGCCAACCATTACAATTAAATCAGCGTACTGGTAACCTTGGTGTTATAGGAAGAAATTCTACTGACCTTGGACCTGTTGGTGACAACTTTAGTGCATTAACTGCTAATTCTGGTGGAGTTCGTGATCAGTTATATAATTTGCAGATGCTTGAGGCAGCTCACCTCAAACTTCCGCAACCTAAGGACTCAGAACATCCCAGGACCTATACTCCTAAACATCCTACAATAACTCCTCCTAGTTTTCCTCAAGTACAGGCACCTATTGTTAATAATCCTGCCTTTTGGGAGAGAGTGGGTCTAGAACCATATGGTACTGATACCCTGTTCTTTTCATTTTACTATCAACAGAACACTTACCAACAATATATGGCTGCAAAAGAGCTAAAGAAGCAGTCTTGGAGATATCACCGCAAGTATAACACATGGTTTCAACGGCATGAAGAGCCAAAAGTTGCAACAGATGAATATGAGCAAGGAACATATGTGTACTTTGATTTCCATATAGAAAATGATGACATGCAACATGGGTGGTGTCAAAGAATCAAGACTGACTTCACTTTTGAATATAATTACCTTGAAGATGAGCCTATTGTCTAG 2415 0.4219 VSASYEQALVDSRKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPRGKAKSETRDWLNNVVAELESHIDNFEAELEGLSVKKGKSKPPRLIHLETSITRHKAHVKKCEFILRLLDNDELSPEQVNDVKDFLDDYIERNQEDFEEFNDVDELYSSLPLDKVDSPEDIVTIPPGLAKVAPVLSLKPLATSASASQTSEQADDTASQDSNSDVGARTPPPKSSTVSSTATTPAGSFATPVSINVPVPNLSSPPAISSVTPGSNSVRSSLEISSAVTASPFVNQSSTMKEEEINSFPGRRPSPSLSDVALIRNISRNSLSNQTTNSIPLVSGNMVSSNGPLGSVSSASEITKRNILVADDRLGSNGMVSALVSPLSNRMIMPQVARASDGTSSVDSSNAGEGATVSGRVFSPSAIPGMQWRPGSPFQNQNDVGHVRARTEIVPDQRERYLQKFQQVQQQGQSALLNMPSFPGGNPKQFSSQQQNPLFQQFNSQSGVGLGLQSSGLSGISSTSLPQPSISIHSPSSQQSLLSVVSKDPDVGNSKVDESQQQIFPDDSGTESTASTGISKNFMNEDELKSTYAVDSPAGGVPTSLPEPVQTSRDIDLSPSQPLQLNQRTGNLGVIGRNSTDLGPVGDNFSALTANSGGVRDQLYNLQMLEAAHLKLPQPKDSEHPRTYTPKHPTITPPSFPQVQAPIVNNPAFWERVGLEPYGTDTLFFSFYYQQNTYQQYMAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIENDDMQHGWCQRIKTDFTFEYNYLEDEPIV* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0846 804 MobiDBLite consensus disorder prediction 542 570 - -
Pvu4g0846 804 MobiDBLite consensus disorder prediction 191 233 - -
Pvu4g0846 804 Gene3D - 644 799 IPR038635 -
Pvu4g0846 804 MobiDBLite consensus disorder prediction 528 570 - -
Pvu4g0846 804 Pfam NOT2 / NOT3 / NOT5 family 661 798 IPR007282 GO:0006355
Pvu4g0846 804 PIRSF NOT_su_3_5 5 804 IPR012270 GO:0006355|GO:0030015
Pvu4g0846 804 PANTHER BNAA10G16600D PROTEIN 1 802 - -
Pvu4g0846 804 PANTHER CCR4 NOT-RELATED 1 802 IPR040168 GO:0030015
Pvu4g0846 804 MobiDBLite consensus disorder prediction 34 55 - -
Pvu4g0846 804 MobiDBLite consensus disorder prediction 459 482 - -
Pvu4g0846 804 MobiDBLite consensus disorder prediction 387 407 - -
Pvu4g0846 804 MobiDBLite consensus disorder prediction 387 403 - -
Pvu4g0846 804 Pfam Not1 N-terminal domain, CCR4-Not complex component 7 161 IPR007207 GO:0005634|GO:0006355
Pvu4g0846 804 Coils Coil 57 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0846 Pvu-Chr4 13390030 13415888 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0846 K12580 - gmx:100780204 1347.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1135 1 29723539 29736287 Pvu4g0846 4 13390030 13415888 PCT