Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0749 ATGTTCAGGCTCACGGCAAAGAGACTCTCTTCTCTCTCTTCGCCCTCGTGCCGACCCTACCACGCTGCTTCCGCTTTTCTCTCCCCAAACGTCGTCGTTCATGATCCCAGATCCCTGCCTTCCTCTCACCTCACCAATTTCCTTCTTCCCTTCAGAGGTTTTACTACTGAATCACTGATCCACACAGAAAAAAACAGCATTATTCCTGATATTCCAGCAACTATTGCTGCTATTAAGAACCCTACTTCTACGATTGTCTATGATGAGCACAACCATGAGAGGTTTCCCCCAGGTGACCCTAGCAAGAGGGCATTTGCTTACTTTGTCCTTACAGGTGGTAGGTTTGCTTATGCCTCTCTGGTCCGTCTCTTAGTCCTCAAGTTTGTGCTTAGCATGTCTGCTAGTAAGGATGTTCTTGCTCTGGCTTCACTTGAGGTTGATCTCTCCAGCATTGAGCCTGGCTCTACAGTGACCGTTAAGTGGCGTGGAAAACCGGTGTTCATCAGGCGCCGAACAGAGGACGATATCAAGCTGGCAAACAGTGTTGATGTGCTATCTCTTCGTGATCCCCAACAGGATGCAGATAGAGTGAAGGATCCAGAATGGCTCATCGTGGTTGGGGTTTGCACACATTTGGGCTGCATTCCATTGCCAAATGCTGGTGACTTTGGTGGGTGGTTTTGCCCATGCCATGAATCACATTATGATATTTCTGGCAGAATTAGGAAGGGACCAGCACCATACAACCTGGAGGTTCCTACCTATTCCTTCTTGGATGAGAACAAGTTATTGATTGGTTGA 801 0.4794 MFRLTAKRLSSLSSPSCRPYHAASAFLSPNVVVHDPRSLPSSHLTNFLLPFRGFTTESLIHTEKNSIIPDIPATIAAIKNPTSTIVYDEHNHERFPPGDPSKRAFAYFVLTGGRFAYASLVRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDVLSLRDPQQDADRVKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHESHYDISGRIRKGPAPYNLEVPTYSFLDENKLLIG* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0749 266 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 176 264 IPR017941 GO:0051537
Pvu4g0749 266 Pfam Rieske [2Fe-2S] domain 149 252 IPR017941 GO:0051537
Pvu4g0749 266 CDD Rieske_cytochrome_bc1 143 266 - -
Pvu4g0749 266 TIGRFAM Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 120 266 IPR006317 GO:0008121
Pvu4g0749 266 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 15 266 - -
Pvu4g0749 266 PRINTS Rieske 2Fe-2S subunit signature 204 215 IPR005805 GO:0016020|GO:0051537
Pvu4g0749 266 PRINTS Rieske 2Fe-2S subunit signature 226 238 IPR005805 GO:0016020|GO:0051537
Pvu4g0749 266 PRINTS Rieske 2Fe-2S subunit signature 238 250 IPR005805 GO:0016020|GO:0051537
Pvu4g0749 266 Gene3D - 135 266 IPR036922 GO:0051537
Pvu4g0749 266 SUPERFAMILY ISP domain 140 263 IPR036922 GO:0051537
Pvu4g0749 266 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 15 266 IPR014349 GO:0051537
Pvu4g0749 266 SUPERFAMILY ISP transmembrane anchor 83 139 - -
Pvu4g0749 266 Pfam Ubiquinol cytochrome reductase transmembrane region 92 137 IPR004192 GO:0008121
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0749 Pvu-Chr4 10472510 10474755 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0749 K00411 - gmx:100806917 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0866 1 14930933 14933651 Pvu4g0749 4 10472510 10474755 PCT