Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0866 ATGTTGAGGGTTGCAGCAAAGAGGCTTTCGTCTCTCTCCTCCTCTCCATGGAGGGCCAACCACGCCGCCTCCGCGGTTCTCTCTCAGAGCCCCGTCGCGCCGTCCCTTTCCTCAGAGGAACGCAGATCCGACTCGTTTTCGCTCCGACCCGAATTCTTTCTTCCCCTCAGAGGTTTTGCTACTGAAGCTCTGATCCACTCTAAAGAAAACAGCCTTATTCCTGAAATTCCTGCAACTGTTGCAGCTGTTAAAAACCCCTCTTCTAAGATTATTTATGATGAACACAACCATGAGCGATTTCCCCCTGGTGACCCAAGCAAAAGGGCATTTGCCTACTTTGTCCTAACTGGTGGCAGGTTTGCTTATGCCTCCTTGGTTCGTCTCCTTGTCCTCAAGTTTGTCCTCAGCATGTCAGCAAGTAAGGATGTTCTTGCCCTGGCTTCACTTGAAGTTGATCTCTCCAGCATTGAGGCAGGGTCTACTGTGACTGTTAAGTGGCGTGGAAAACCAGTATTCATCAGGCGCAGAACAGAAGATGATATTAAGCTGGCAAACAGTGTTGATGTTGCATCTCTTCGTGATCCCCAGGAGGACGCTGACAGGGTAAAAAATCCTGAGTGGCTTATTGTGGTTGGGGTGTGCACACATCTGGGTTGCATTCCCTTGCCAAATGCGGGTGACTTTGGTGGATGGTTTTGCCCATGCCATGGTTCACATTATGATATTTCTGGCAGAATTAGGAAGGGACCGGCACCATACAATCTAGAGGTACCAACTTATACCTTCTTGGAGGAAAACAAGTTGATGATTGGTTGA 816 0.489 MLRVAAKRLSSLSSSPWRANHAASAVLSQSPVAPSLSSEERRSDSFSLRPEFFLPLRGFATEALIHSKENSLIPEIPATVAAVKNPSSKIIYDEHNHERFPPGDPSKRAFAYFVLTGGRFAYASLVRLLVLKFVLSMSASKDVLALASLEVDLSSIEAGSTVTVKWRGKPVFIRRRTEDDIKLANSVDVASLRDPQEDADRVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLEENKLMIG* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0866 271 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 1 271 IPR014349 GO:0051537
Pvu1g0866 271 Gene3D - 140 271 IPR036922 GO:0051537
Pvu1g0866 271 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 181 269 IPR017941 GO:0051537
Pvu1g0866 271 TIGRFAM Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 125 271 IPR006317 GO:0008121
Pvu1g0866 271 CDD Rieske_cytochrome_bc1 148 271 - -
Pvu1g0866 271 Pfam Rieske [2Fe-2S] domain 155 257 IPR017941 GO:0051537
Pvu1g0866 271 Pfam Ubiquinol cytochrome reductase transmembrane region 101 142 IPR004192 GO:0008121
Pvu1g0866 271 PRINTS Rieske 2Fe-2S subunit signature 209 220 IPR005805 GO:0016020|GO:0051537
Pvu1g0866 271 PRINTS Rieske 2Fe-2S subunit signature 231 243 IPR005805 GO:0016020|GO:0051537
Pvu1g0866 271 PRINTS Rieske 2Fe-2S subunit signature 243 255 IPR005805 GO:0016020|GO:0051537
Pvu1g0866 271 SUPERFAMILY ISP domain 145 265 IPR036922 GO:0051537
Pvu1g0866 271 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 1 271 - -
Pvu1g0866 271 SUPERFAMILY ISP transmembrane anchor 88 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0866 Pvu-Chr1 14930933 14933651 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0866 K00411 - gmx:100806917 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0866 1 14930933 14933651 Pvu1g0866 1 14930933 14933651 ECH
Pvu1g0866 1 14930933 14933651 Pvu4g0749 4 10472510 10474755 PCT