Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0741 ATGTCGTTTGTGACGGCACGTACAGGGCGACAACGACAGCGTTACGAAGACAACATGCGCCTCGTTTCCGGATGTATTCCCTACAGATGGAAAAAGGGAAAAGGAGATCAAAATGAAGATACCGAGGGGATGATAGAAGTACTTATGATTTCTTCACCAAAACGTGATGACCTTGTGTTTCCAAAGGGAGGATGGGAGGATGATGAAACTGTTACAGAAGCTGCATGCCGTGAAGCCCTAGAGGAAGCAGGAGTTAAAGGGATTGTAAGAGAAACTCCCTTGGGGAGATGGGAATTCAGAAGCAAAAGCAGCAAGGATTCATGTAGCCAGGAAGGATGGTGTAGAGGGTACATGTTTTCCTTAGAGGTGACTGAAGAACTTGAGACCTGGCCAGAGCAAAAAGACCATAATCGGCAATGGGTAAACATAAAAGAAGCATTCAGACTGAGCCGATATGATTGGATGTGCAAGGCATTGGAAGTGTTTTTAAGAGTTATGGCAGAAGAAGGAAAGCTAAAGAAGGAGGAAAACAATGTTGATTGTTCTTCAATGTCAGTGCTAGATGTGTCAGAAAGTCAAAATGTGTCATCCAAATGCTATAAAAGAATCACTACCACACAACATCATGGTATATCATCAAGAGCCAATATCCTGTCCCATGCTTCCCAGGAGATAGCAATTACTTAG 687 0.4338 MSFVTARTGRQRQRYEDNMRLVSGCIPYRWKKGKGDQNEDTEGMIEVLMISSPKRDDLVFPKGGWEDDETVTEAACREALEEAGVKGIVRETPLGRWEFRSKSSKDSCSQEGWCRGYMFSLEVTEELETWPEQKDHNRQWVNIKEAFRLSRYDWMCKALEVFLRVMAEEGKLKKEENNVDCSSMSVLDVSESQNVSSKCYKRITTTQHHGISSRANILSHASQEIAIT* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0741 228 PANTHER NUDIX HYDROLASE 12, MITOCHONDRIAL 1 191 - -
Pvu4g0741 228 SUPERFAMILY Nudix 10 164 IPR015797 -
Pvu4g0741 228 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 191 - -
Pvu4g0741 228 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 4 165 - -
Pvu4g0741 228 ProSiteProfiles Nudix hydrolase domain profile. 18 163 IPR000086 -
Pvu4g0741 228 ProSitePatterns Nudix box signature. 63 84 IPR020084 GO:0016787
Pvu4g0741 228 CDD Nudix_Hydrolase_9 21 155 - -
Pvu4g0741 228 Pfam NUDIX domain 42 155 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0741 Pvu-Chr4 10332450 10337835 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0741 K07766 - gmx:100780722 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1036 1 22566685 22568944 Pvu4g0741 4 10332450 10337835 PCT