Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1036 TGTATTCCCTATAGATGGAGAAAGGACAACACAGATCTAATGGGAGAAACTGAGGAGATAATAGAAGTACTAATGATTTCTTCACCAAAACGTGATGACCTTGTATTCCCAAAGGGTGGATGGGAGGATGATGAGACTGTTACAGAAGCTGCTTGCCGCGAAGCTCTAGAGGAAGCAGGAGTTAAAGGAATACTGAGAGAAATTCCATTAGGAATATGGGAGTTCAGAAGCAAAAGCAGTCAAGACTTGTGTAGCATGGAAGGAGGCTGCAGAGGATACATGTTTGCCTTGGAGGTGACTGAAGAACTTGAGACATGGCCAGAGCAGAACAATCGTGCTCGCCAATGGTTAAACATAAAAGAGGCATTCAGACTCAGCAGATATGACTGGATGTCTAATGCCCTTGAGGCGTTTTTGAGAGTCATGGAAGAAGACAGAAAGCTTGATGAGGAGAAAGACCAGAATATTGAACTTGAACCACCTTCAATTACAGTAGCAGATGTGCCAGAATGCCAAAGTATGTCATCTAACTGCTATAAAAGATCCTCTACCATGCAGCACCATGGCATGCCTCCTACGGCCACTCTTCTGTCACGTGCTACTCAAGAGATAGCCATCCACTTTGGTTATTGA 633 0.4408 CIPYRWRKDNTDLMGETEEIIEVLMISSPKRDDLVFPKGGWEDDETVTEAACREALEEAGVKGILREIPLGIWEFRSKSSQDLCSMEGGCRGYMFALEVTEELETWPEQNNRARQWLNIKEAFRLSRYDWMSNALEAFLRVMEEDRKLDEEKDQNIELEPPSITVADVPECQSMSSNCYKRSSTMQHHGMPPTATLLSRATQEIAIHFGY* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1036 210 ProSitePatterns Nudix box signature. 39 60 IPR020084 GO:0016787
Pvu1g1036 210 ProSiteProfiles Nudix hydrolase domain profile. 6 139 IPR000086 -
Pvu1g1036 210 PANTHER NUDIX HYDROLASE 12, MITOCHONDRIAL 1 163 - -
Pvu1g1036 210 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 1 142 - -
Pvu1g1036 210 SUPERFAMILY Nudix 22 145 IPR015797 -
Pvu1g1036 210 Pfam NUDIX domain 23 136 IPR000086 -
Pvu1g1036 210 CDD Nudix_Hydrolase_9 1 131 - -
Pvu1g1036 210 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1036 Pvu-Chr1 22566685 22568944 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1036 K07766 - gmx:100794003 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1036 1 22566685 22568944 Pvu1g1036 1 22566685 22568944 ECH
Pvu1g1036 1 22566685 22568944 Pvu4g0741 4 10332450 10337835 PCT