Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0726 ATGGAGGTACACACTCCAGTTATTCCCAAGAAGCTGTGGAATGTGTTGAGGATCACCTTCTTCATGATCAGGAAGGGTTTGGTGTCAAAGAGGAAGCTGATTATGGACATGAATTTGATGATGAAAAAAGGGAAACTGCTTAGAAAATCTATGAGCAATTTCATGTCATTTCATCATAACCATCATCACTCAAAGAGTTTGGTACGTGGCTATGGCATACAGGAGTATGAATTCTCTTGCAGCAACAGTCCAAATCCTGTTTTTTTCCATGTGCCAAAGAGGAAGCTCCATTTCAACTTCCCTTGCATCAACACCCCAGAGGTTGTTGAGGAATCTATGCCTGTGGTGTTGGTTCCTATGACACCTGAATACACTTTCAAAAACCTTAGGTTTGATGCTTCTGATTTTGCTCCTGGAGAGATGAAGAGCCCCCTCCTCTCACCCTTCTCTGTGAGGATATCCAACTATTCATCTGAGGATGAGAATGAAGAGGGTGGACATCAAGTTGATGATGAGGCTGAGGATTTCATCAAAAGGTTCTATGAACAGCTAAGAATGCAAGGCCGAATGCAGTTGCTGCAGTACCAAGAGATGTAA 597 0.4271 MEVHTPVIPKKLWNVLRITFFMIRKGLVSKRKLIMDMNLMMKKGKLLRKSMSNFMSFHHNHHHSKSLVRGYGIQEYEFSCSNSPNPVFFHVPKRKLHFNFPCINTPEVVEESMPVVLVPMTPEYTFKNLRFDASDFAPGEMKSPLLSPFSVRISNYSSEDENEEGGHQVDDEAEDFIKRFYEQLRMQGRMQLLQYQEM* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0726 198 Pfam Cotton fibre expressed protein 168 198 IPR008480 -
Pvu4g0726 198 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 198 - -
Pvu4g0726 198 PANTHER OS01G0930500 PROTEIN 1 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0726 Pvu-Chr4 9761638 9763026 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0726 - - pvu:PHAVU_004G067900g 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1023 1 21921749 21922795 Pvu4g0726 4 9761638 9763026 PCT