Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1023 ATGGAGGTACATTCTCCTGTTGTGGCAAAGAGATTATGGAATGTGATGAGGATAACCTTCTTCATGATAAGGAAGGGTCTTATATCAAAAAGGAAGATGATCATGGACATGAACTTGATGATGAAGAAAGGGAACGTGAGAAAATCTCTAAGCAATCTCATGTCATCACATCATCATCACCACAACCCTGAGAGCGTGACACGAGGTGGCTTAGGGGTGCATTATGAATTCTCATGCAGCAATAGTCCAAATCCTGTTTTCTTCCACATGCCAAAGCGCAAGCACCATTTCAACTTTCCCTGCATTCATACCCCTGAAGTTCTCGACGATGAACACCGTTTTTCATTCGAAGTTGAAAGTGATGTGCCTAAGGGTGTGGTTACCGTGCCAAAAACCCCAGAATATATGTACAACATATTTGTTCCTGGAGAAAAAAGCCCTCTTCTCTCACCGTTTTCTGTGAGAGTGTCCAATTATTCTGCATTGGATGAAAGTGAGGAAATTGGAAATGATGATCATGTTGTTGATGATCAGGCTGAGGATTTTATCAGAAAGTTCCATGACCAGCTTAGGTCGCAAAGCCCCGTGCAGTTCCTAGGTTACTAA 606 0.4241 MEVHSPVVAKRLWNVMRITFFMIRKGLISKRKMIMDMNLMMKKGNVRKSLSNLMSSHHHHHNPESVTRGGLGVHYEFSCSNSPNPVFFHMPKRKHHFNFPCIHTPEVLDDEHRFSFEVESDVPKGVVTVPKTPEYMYNIFVPGEKSPLLSPFSVRVSNYSALDESEEIGNDDHVVDDQAEDFIRKFHDQLRSQSPVQFLGY* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1023 201 PANTHER OS01G0930500 PROTEIN 1 201 - -
Pvu1g1023 201 Pfam Cotton fibre expressed protein 175 193 IPR008480 -
Pvu1g1023 201 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1023 Pvu-Chr1 21921749 21922795 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1023 - - gmx:100806803 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1023 1 21921749 21922795 Pvu1g1023 1 21921749 21922795 ECH
Pvu1g1023 1 21921749 21922795 Pvu4g0726 4 9761638 9763026 PCT