Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2859 ATGTCGGTGGTTCTGAGAAAAAGACTAGGTTGCTGCACTAAGGAAACCAAAATCAGCATTGATTTTGATGTGCCAGAGAGTATTGTGACATATAATGGCCTTGAGAGTTGCCCTTCGGATAATTGTTCTTATGGAGATGAAAGCAGAACGAGTAGAGGAGATGGATGTATAACTGATTCATTCAATGATGATGACTCCAGTTGTTGTTCATCCAGTAAAGATGCTTTTGGATCATTCTCTTCAAAATGTTTGACAATGAAAAGAGATGAACATGGATTGGAAGAGTGGGAACTCTCAGAAAGTCCTCCAAATTTTTATCTTAAAGACAAGTCTGCTTTTGACGTCCAAAGTTCAGATGTAGAAGCCATGAAGGAGAAGTTTGCAAAGCTGTTGCTAGGTGGTGATGTTACAGGAGGATCAAAGGGCCTCAATACAGCTTTAGCACTGTCTACTGCTATCACAAGCCTTGCAGTGACGGTTTTTGGTGAGTTGTGGAAATTGGAACCACTGTCTGAAGAAAGGAAGAGCAAATGGCAAAGAGAAATGGGATGGTTGTTGTTTCCAACTAACTATATGGTTGAGTTAGTTCCTGCTAAGCAAAACGGTGCCAATGGTGGAATCTTTGAGGTAATGACTCCAAAAGCCCGTTCTGACATCAAAATGAATCTTCCAGCACTTCAGAAGCTGGACTCAATGCTTATGGAGACGCTAGAGTCGATGGTGAATACCGAGTTTTGGTATGCAGAGGAAGGAAGCCGATCAGAAGGGAGGAACACAACTGGAAGACAAAGCAAAAGATGGTGGCTTCCATCACCCCGAGTGCCAAGAACTGGACTTTCTGAAGTTGAAAGAAAGAGGCTACTTCATCAAGGAAGAATAGTGCATCAAATATTCAAGGCTGCCAAATCAATCAATGATAATATGTTGCTTGAGATACCCGTGCCAACAGTGATTAAGGATGCACTTCTGAAGAGTGGAAAGGCAAGCCTGGGAGATGAACTGCACAAGGTTTTGATGGCTGAATCGAGTTCTGGAGAAGAAATGCTTAAAGCTCTAAATTTGAAATCTGATCATGCTATCCTAGAGACCATTAATAAATTGGAAGCTGCTACATTTTCATGGAAAGAAAGAATCATACAAGAAAATAGTGGCAAATCCCCTATTCGAACCCCATGGTCCTTCCTGAAGGACCCTGTGTCAGGTATAGATAAGATGGAACTGTTGTTGGAACGTGCAGAAACCCTTCTAAATCTGCTTAAAACCAGACATCCAAACCTTCCTCAAACATTTCTGGATGCTGCAAAAGTTCAATATGGCAAGGATATTGGGCATTCCATATTGGAAGCATACTCTAGAGTTCTTGGAAGTTTAGCCTTTAGCATACTGTGTAGAATAGGAGATATATTGCAGGAGGATGCTTTAAGCAATCCCAATTCACCCATCTCAATAACTCACTCTCCTGGGACAAATCTCTCTGAAGCTTGGGTGGTTGGTTCACGTATCAGACACTCTTTAATAGACAAGATGAATGAGACAGATGGAGAACATTGTGGTTCCAGTTGTGGCAGTACTTCTGATGTAGAACTCCCATCTACTGAGGCCACTGCCAACATTATAACAGCCACTCCAAGCCGTGGTAGATTGTGGTGCATTGGTAGAAACTTGTAA 1668 0.4191 MSVVLRKRLGCCTKETKISIDFDVPESIVTYNGLESCPSDNCSYGDESRTSRGDGCITDSFNDDDSSCCSSSKDAFGSFSSKCLTMKRDEHGLEEWELSESPPNFYLKDKSAFDVQSSDVEAMKEKFAKLLLGGDVTGGSKGLNTALALSTAITSLAVTVFGELWKLEPLSEERKSKWQREMGWLLFPTNYMVELVPAKQNGANGGIFEVMTPKARSDIKMNLPALQKLDSMLMETLESMVNTEFWYAEEGSRSEGRNTTGRQSKRWWLPSPRVPRTGLSEVERKRLLHQGRIVHQIFKAAKSINDNMLLEIPVPTVIKDALLKSGKASLGDELHKVLMAESSSGEEMLKALNLKSDHAILETINKLEAATFSWKERIIQENSGKSPIRTPWSFLKDPVSGIDKMELLLERAETLLNLLKTRHPNLPQTFLDAAKVQYGKDIGHSILEAYSRVLGSLAFSILCRIGDILQEDALSNPNSPISITHSPGTNLSEAWVVGSRIRHSLIDKMNETDGEHCGSSCGSTSDVELPSTEATANIITATPSRGRLWCIGRNL* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2859 555 ProSiteProfiles PRONE domain profile. 110 482 IPR005512 GO:0005085
Pvu3g2859 555 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 21 554 IPR038937 GO:0005085
Pvu3g2859 555 Coils Coil 402 422 - -
Pvu3g2859 555 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 14 21 554 - -
Pvu3g2859 555 Gene3D PRONE domain, subdomain 1 349 481 - -
Pvu3g2859 555 Gene3D PRONE domain, subdomain 1 112 348 - -
Pvu3g2859 555 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 118 476 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2859 Pvu-Chr3 50310992 50316487 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2859 - - var:108332640 986.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2859 3 50310992 50316487 Pvu3g2859 3 50310992 50316487 ECH
Pvu2g1272 2 24913598 24921328 Pvu3g2859 3 50310992 50316487 PCT