Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1272 ATGTTGAGGATGAGAAAAAGACTAGCATGCTGCACCAAGGGAAGGAAATTTAGCATCGATCTTGATGAGAAAGAGAGGATTATGACATATAATGGCCTTGAAAGTTGCTTGCTGAATAACCAGTCTTACGAAGATGAGAGCAGAACAAGTAGAGGAGATGAATGCATAACTGATTCATTTGATGATGACTCCAGTTGTTCCTCCAGCAAGGATGCTTTTGGATCATTCTCTTCAAAATGTTTAACGATGAAAAGGGATGATAAAGGACTGGAGGAATGGGAGCTCTCAGAAAGTCCTCAAGATTTTTATGTCAAAGATAAGCCTTATGGTATGGAACATTCTGATATAGAAGCCATGAAGGAAAAGTTTTCGAAGCTTTTGCTAGGTGAAGATGTTACAGGAGGAAACAAGGGCCTCAGTACAGCTTTGGCGATATCTAATGGCATCACAAACCTAGCAGTGACGGTTTTTGGAGAGCTGTGGAAATTGGAACCACTATCTGAAGAAGGGAAGGAAAAATGGCAAAGAGAGATAGACTGGTTATTGTCTCCTACCAACTATATGGTTGAGCTAGTTCCCGCTACGCAAAGTAATGCCAGTGGTGGGATTTTTGAGATAATGACCTCAAAAGCTCGTGCAGACATCCTCATGAATCTTCCAGCACTTCAGAAGTTGGATTCTATGCTGATTGAGGCACTAGATTCCATGGTGAATTCGGAGTTTTGGTATGCAGAGGGAGAAAGCCGGGCAGAAGGGAGGGACACAAATGCAGAGCATAGCAAAAAATGGTGGCTTCCATCACCCCAAGTACCAAAAAGTGGTCTTTCTGATACTGAAAGAAAGAAGCTGCTTCATCAGGGTGGGGTGGTACGTCAAGTATTCAAGGCTGCCAAATCCATCAATGAAAGTGTTTTGCTTGAAATGCCTGTGCCAGCCATTATTAAAGATGCACTTGCAAAGTCTAGAAAGACAAACCTTGGACATGAATTGCACAAGGTTTTGACGGCTGAATCAAGCTCTGCAGAAGACATGCTTAAATCGCTCAACATGAAATCTGAACATGTTGTCCTAGAGACTGTTAATAGACTGGAAGCTACTATATTCTCATGGAAAGAGAGAATTGCAGAACAAGTTAGCGGCAAACACCCAGTTAGACCCTCGTGGTCACCTTTTGTGAAGGATCCTATGTTAGAGCTTGATAAACTAAAGTTATCATCGGACCGTGCCGAAACACTACTCCAGCTGATTAAAATCAGATACCCAAACCTTCCTCAAACATTTCTCGATGCTACCAAAGTTCAATATGGCAAGGATATTGGACATTCTATTTTGGAAGCATATTCCAGAGTTCTAGCAAATTTAGCCTTCAGCATGCTGTCTAGAATAGGAGATATATTGCAGGAGGATTCTTTAAGCAATCCTAATTCACCTGTGGTGATAGATTACTCTCCTGGGATGAATCTTTCTCAAACTTGGGTGGTGGATTCACATATCAAGCAGTCCTTACTTGATAAGATGAACAAGGCAGATGGGCAATATTCTGATTATTCACGCTGTTATAGTACTTCTGATCTAGAACATTCATCTATTCATTCCAAATCTATTACCACGCGAAATCAGAGTGGTGGCTGGTGCATTAGTAGAGAAGTTTGTTCAAGTCTGTCTCCTAGAAATTCTCCATAG 1683 0.4141 MLRMRKRLACCTKGRKFSIDLDEKERIMTYNGLESCLLNNQSYEDESRTSRGDECITDSFDDDSSCSSSKDAFGSFSSKCLTMKRDDKGLEEWELSESPQDFYVKDKPYGMEHSDIEAMKEKFSKLLLGEDVTGGNKGLSTALAISNGITNLAVTVFGELWKLEPLSEEGKEKWQREIDWLLSPTNYMVELVPATQSNASGGIFEIMTSKARADILMNLPALQKLDSMLIEALDSMVNSEFWYAEGESRAEGRDTNAEHSKKWWLPSPQVPKSGLSDTERKKLLHQGGVVRQVFKAAKSINESVLLEMPVPAIIKDALAKSRKTNLGHELHKVLTAESSSAEDMLKSLNMKSEHVVLETVNRLEATIFSWKERIAEQVSGKHPVRPSWSPFVKDPMLELDKLKLSSDRAETLLQLIKIRYPNLPQTFLDATKVQYGKDIGHSILEAYSRVLANLAFSMLSRIGDILQEDSLSNPNSPVVIDYSPGMNLSQTWVVDSHIKQSLLDKMNKADGQYSDYSRCYSTSDLEHSSIHSKSITTRNQSGGWCISREVCSSLSPRNSP* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1272 560 ProSiteProfiles PRONE domain profile. 106 479 IPR005512 GO:0005085
Pvu2g1272 560 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 14 20 552 - -
Pvu2g1272 560 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 114 473 IPR005512 GO:0005085
Pvu2g1272 560 Gene3D PRONE domain, subdomain 1 346 479 - -
Pvu2g1272 560 Gene3D PRONE domain, subdomain 1 109 345 - -
Pvu2g1272 560 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 20 552 IPR038937 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1272 Pvu-Chr2 24913598 24921328 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1272 - - gmx:100778067 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1272 2 24913598 24921328 Pvu3g2859 3 50310992 50316487 PCT