Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2852 ATGCCCACATCCTCAGAACTCCCTGAGGAAATGGCCATCACCACCAAGTTCAGAAAACCCACTTCACCTTCAAACTTCTACTTTTGCACCACTCTTTTCTTCATTGTCCTCTTCACTATACCTGTTCTTTTCCTCCTCCATACCCCAACCACCACCTCCATATGCACCACCCTTGCTTCCTCCCAAAATCAAACTTGGTCAGGTGATCTTCAGTTGGCTCAATTTGCATGGAACCACCTCTCCTTTTTTGAGCACAAGACACCACCCTTTGCCCTCAAAATTGCTGTCTTCTCCAGGAAGTGGCCTATTGGCACAACCCCTGGTGGCATGGAGCGCCATGCTCACACCCTTCACACTGCTTTAGCACGCCTTGGCCATCAGATTCATGTCTTTACATCTCCACCCCAAGATGAAAGCACTTCAATAAAATCATCTGAGGTGAACAAAGACAGCCATCAAGAAGGTGCACCTTCTTCCCCTTACATTCATTTCCATGAAGGTGAGCCTGGCAGGTGGCGCTATAACAAGGCATGGGAGCAATTTGTGGAAGAAAACCGCAGAGAACCATTTGATGTTGTGCACTCAGAAAGTGTGGCACTCCCTCATTGGCTAGCACGCAACATGTCAAACCTTGCAGTGTCTTGGCATGGCATAGCCCTGGAGAGCTTGCAATCAAGCATTTTCCAGGACTTGGCTCGCCAGCCAGATGAGCCCATGTCCCCTCTTTTCAACCAAAGCATACAGGGTGTTGTGCCAAAGGTGCTGAATGAGATAAGGTTTTTCAGGAACTATGCGCATCATGTTGCTATCAGTGATAGCTGTGGTGAGATGCTGAGGGATGTGTACCAAATTCCTAACAGAAGAGTTCACGTAATACTAAATGGTGTTGATGAGGATGAGTTTAGAGAAGATGCAGAATTGGGAAGGGAATTCAGAAGAAAAATTGGCATTCCAGGGAATGCAAGTTTGGTGCTTGGTGTTGCTGGAAGATTAGTGAAGGACAAAGGCCATCCTCTGCTTCATGAAGCTTACTCAAGGCTTATAACCAAGTACCCTAATGTGTACTTGATTGTTGCTGGTTCTGGACCATGGGAGAACAGGTACAGGGATTTGGGGAGTCAGGTTCTTGTGCTGGGATCGATGAGTCCTTCCATGTTAAGAGGGTTCTACAATGCAATTGACATTTTTGTGAATCCCACACTCAGACCACAAGGGCTTGACCTTACATTGATGGAGGCAATGATGAGTGGGAAACCTCTTTTGGCATCAAGATTTCCAAGCATTAAAGGGACTATTGTGGTTGATGATGAATATGGTTACATGTTTTCCCCTAATGTGGAGTCCCTCTTGGAGGCACTGGAAGAAGTGGTAAAGGAAGGACCGCAGAGGCTAGCTATGAGGGGCAAGGCATGTCGGGAATATGCTGCCAAAATGTTTACAGCAAGAAAGATGGCATTAGCATATGAGAGGTTATTCTTGTGTATAAAAAACCACACCTTCTGTACCTATCCTTGA 1515 0.4627 MPTSSELPEEMAITTKFRKPTSPSNFYFCTTLFFIVLFTIPVLFLLHTPTTTSICTTLASSQNQTWSGDLQLAQFAWNHLSFFEHKTPPFALKIAVFSRKWPIGTTPGGMERHAHTLHTALARLGHQIHVFTSPPQDESTSIKSSEVNKDSHQEGAPSSPYIHFHEGEPGRWRYNKAWEQFVEENRREPFDVVHSESVALPHWLARNMSNLAVSWHGIALESLQSSIFQDLARQPDEPMSPLFNQSIQGVVPKVLNEIRFFRNYAHHVAISDSCGEMLRDVYQIPNRRVHVILNGVDEDEFREDAELGREFRRKIGIPGNASLVLGVAGRLVKDKGHPLLHEAYSRLITKYPNVYLIVAGSGPWENRYRDLGSQVLVLGSMSPSMLRGFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIKGTIVVDDEYGYMFSPNVESLLEALEEVVKEGPQRLAMRGKACREYAAKMFTARKMALAYERLFLCIKNHTFCTYP* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2852 504 Pfam Glycosyl transferases group 1 313 467 IPR001296 GO:0016757
Pvu3g2852 504 MobiDBLite consensus disorder prediction 134 162 - -
Pvu3g2852 504 Gene3D Glycogen Phosphorylase B; 91 312 - -
Pvu3g2852 504 PANTHER GLYCOSYLTRANSFERASE 11 504 - -
Pvu3g2852 504 Gene3D Glycogen Phosphorylase B; 313 477 - -
Pvu3g2852 504 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 93 492 - -
Pvu3g2852 504 Pfam Glycosyltransferase Family 4 108 299 IPR028098 -
Pvu3g2852 504 PANTHER GLYCOSYLTRANSFERASE 11 504 - -
Pvu3g2852 504 CDD GT4_PimA-like 93 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2852 Pvu-Chr3 50261078 50262883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2852 11 504 Glycosyltransferase AT4G19460 65.269 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2852 - - aprc:113860121 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2852 3 50261078 50262883 Pvu3g2852 3 50261078 50262883 ECH
Pvu2g1285 2 25088917 25090380 Pvu3g2852 3 50261078 50262883 PCT