Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1285 ATGGCCTTCAACAACAAATCAAAGAAGTCCAGTTCCCCTTCTAATTTTACTTTCTGTGTCACCCTTTTCTTCCTTGTCCTCTTCACCATACCAGCATTTTTCCTCCTCCACACACCCACCACATGCACCACCCTCTCCAAAACCTGGTCAGGTGATCTTCTTTTAGCCAAATTTGCATGGAACAAACTCCCATTTCTGGAACACAACCCTTCACCCTTACCTCTCAAAATCGCTGTCTTCTCTAGAAAATGGCCTATTGGAACTACTCCTGGTGGCATGGAGCGCCATGCATACACACTTCACACAGCTCTAGCTCAGCGGGGCCACAAGGTTCATATATTCACCTCTCCTCCAGAAGAAGAAACCACTTCAACCTTCTCTTCAGACACAACCAATCACCAAGCAGATGTTAATGCACCCTCTTCACCCTTCATCCATTGCCATGAAGGGGAGCCAGGCAAGTGGCGCTACAACAAAGCATGGGAACAGTTTCTGGAACAAAACCAGAAAGAACCCTTCGATGTTGTTCACTCAGAAAGTGTAGCACTTCCTCACTGGCTCGCTCGCGACCTTCCAAACCTTGCAGTTTCATGGCATGGCATAGCCCTTGAGAGTTTGCAATCTAGCCTTTTCCAAGACTTAGCGCGTAGAACTGATGAACCTAGATCCCCGGATTTTGACAAAGGTTTACAAGGGGTTCTCCCTAAGATTTTAAATGAGATAAGGTTCTTCAGAAACTATGCACACCATGTTGCTATCAGTGATAGTTGCGGTGAGATGTTAAGAGATGTGTACCAAATCCCCAGCAGAAGAGTGCATGTGATTCTCAATGGAGTTGATGAGGGTGACTTCAGAGAAGACGTGGAATTAGGAAGGGAATTTAGAACCAAAATTGGCATTCCAAGCAATGCTAGTTTAGTGCTTGGTGTCGCTGGAAGATTAGTGAAGGACAAAGGCCACCCTCTCCTTCATGAAGCATACTCTAGGCTAATAACAAAACACCCCAATGTGTATTTGATTGTAGCTGGCTCAGGACCATGGGAGAATCGATATAGGGATTTAGGAAACCAAGTTCTTGTTCTTGGATCCATGAGTCCTTCCATGCTACGAGCATTCTATAATGCCATTGACATTTTTGTCAATCCGACCCTTAGACCACAAGGGCTTGACCTTACTCTGATGGAAGCCATGATGAGTGGGAAACCCCTTTTGGCATCAAGGTTTCCAAGCATCAAAGGTAGTGTTGTGGTGGATGATGAATTTGGCTTTATGTTCTCTCCCAACGTGGAATCTCTCATGGAGGCTCTTGAAGCAGTGGTGAAGGAAGGAAAGGTAGGGCTTGCAAGGAGGGGAAAGGCATGCCGTGAATATGCAATTTCTATGTTTACAGCAACAAAGATGGCGTTGGCATATGAGAGACTATTCCTATGCATAAAAGAAGATAAATTTTGTAACTATTATTGA 1464 0.4488 MAFNNKSKKSSSPSNFTFCVTLFFLVLFTIPAFFLLHTPTTCTTLSKTWSGDLLLAKFAWNKLPFLEHNPSPLPLKIAVFSRKWPIGTTPGGMERHAYTLHTALAQRGHKVHIFTSPPEEETTSTFSSDTTNHQADVNAPSSPFIHCHEGEPGKWRYNKAWEQFLEQNQKEPFDVVHSESVALPHWLARDLPNLAVSWHGIALESLQSSLFQDLARRTDEPRSPDFDKGLQGVLPKILNEIRFFRNYAHHVAISDSCGEMLRDVYQIPSRRVHVILNGVDEGDFREDVELGREFRTKIGIPSNASLVLGVAGRLVKDKGHPLLHEAYSRLITKHPNVYLIVAGSGPWENRYRDLGNQVLVLGSMSPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIKGSVVVDDEFGFMFSPNVESLMEALEAVVKEGKVGLARRGKACREYAISMFTATKMALAYERLFLCIKEDKFCNYY* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1285 487 Pfam Glycosyl transferases group 1 307 444 IPR001296 GO:0016757
Pvu2g1285 487 PANTHER GLYCOSYLTRANSFERASE 1 486 - -
Pvu2g1285 487 CDD GT4_PimA-like 76 475 - -
Pvu2g1285 487 Gene3D Glycogen Phosphorylase B; 289 458 - -
Pvu2g1285 487 Gene3D Glycogen Phosphorylase B; 75 288 - -
Pvu2g1285 487 PANTHER GLYCOSYLTRANSFERASE 1 486 - -
Pvu2g1285 487 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 76 475 - -
Pvu2g1285 487 Pfam Glycosyltransferase Family 4 91 281 IPR028098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1285 Pvu-Chr2 25088917 25090380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1285 1 486 Glycosyltransferase AT4G19460 63.473 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1285 - - gmx:100817087 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1285 2 25088917 25090380 Pvu2g1285 2 25088917 25090380 ECH
Pvu2g1285 2 25088917 25090380 Pvu3g2852 3 50261078 50262883 PCT