Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2772 ATGATGGAGAAAGCAGATTCTGTACAGAAGCTATATACGCGAATGCGGCTTTGGGAATTTCCGGATCAGTATGTGATTGAACCAACAGATGGATCTTCTGGTTCTTATTTGGCAGTTAGTCGAAAAGATGGCTCCATCAAGCTCATTGATGAGATTCGTGAATGCAGCACCGTTCGAGTTCCTAAGATTTTTACAATTTATGGTGTGGCTGGGATGTTGAGGCTTTTGGAGGGATCGTATTTGCTGGCTATAACTGGGCGTGAATGTGTTGGATCCTACTTGGGACATCCAATTTTCAAAGTTTCGTCTCTAAAGGTTTTTCCATGTGATTGTTCCCTCGATAATACCCCTTCTGAACAACAGAAGAAGACAGAGATGGATTTTTCTGGGATATTAAAAGTTGCTGAGAAGACTACGGGTCTGTTCTTCTCGTACGACGCCAATTTAACTCTCAGTACCCAAAGACTAAATGACCTTGGTGATGAGTCTAGGTTGCTTCCCCTTTGGAGACAGGCAGAGCCTCGATTTCTATGGAATAATTATCTGTTGGAAGTGCTTATAGAGAACAAGCTTGATCCATACTTACTCCCTATCGTCCAAGGCAGCTTTCATCACTTTGAAGCTGCTATTGGGAAAGATATTATTGAAATCACTATAATTGCTAGGAGATGCACGAGAAGAAATGGAACCCGAATGTGGAGAAGAGGAGCTGATCCTGATGGATATGTGGCTAATTTTGTGGAAACCGAGCAAATTATGCAGATCAATGGGTATACAGGATCAATTGTTCAGGTTCGTGGTTCAATTCCGGTGCCTTGGCAGCAAATTGTTGACTTAACATATAAACCGAAGTATGAATTATTGAAACATGACGAAGCTCCCCGAGTCTTGGAGAGGCATTTCTTAGATTTAAGAAAAAAGTATGGGTCTGTGTTAGCTATTGACCTAGTTAACGAGCATGGTGGAGAAGGTCGGCTTTGCGAAAAATTTGGAAAGACAATGCAACATGTATCTGGTAATGATGTGAGATATCTGCATTTCGATTTCCATCACATTTGCGGGCACATTCATTTTGATCGTCTTTCAATCCTTTATGATCAAATATCTGATTTTCTTGAGAGAAATGGATACCTTCTATTGAATGAAAAGGGAGAGAAAATGAAGGAGCAACTTGGGGTTGTTAGAACCAATTGTATTGATTGTCTAGACCGTACAAATGTTACTCAGAGCATGATAGGCCGAAATATGCTAGAATTCCAGCTTAGAAGAATTGGGATCTTTGGTGCTGAGGAAACCATTAGTTCACATCCAAATCTAGATGACAACTTTAAGATCTTGTGGGCCAATCACGGGGATGATATAAGTACTCAATATACAGGCACTCCTGCTCTCAAAGGAGACTTTGTCCGATTTGGGCATCGTACAATGCAGGGGATAATAAATGATGGGGTGAATGCTCTTATGCGCTATTATTTGAATAACTTCTGTGATGGAACAAAGCAGGATTCCATTGATCTCTTACAAGGGCATTTCATAGTCTCTGCCAACAGAGAACAGACTCCTTCTCAGAGTCAAGGCATTGAAGCTATTGCTTCATTTCCTCTGGCTTTGGGTCTGGTTTTGACTGGGTTCTTTTTCACAACCATGTCGTTGACGCAAGTTAGATATGATTTTAAGCACTTGTTCTTCTCACTTTTGTGGGCAAGCATTAGTGTCGGTATAGCAGCATTTGTGAAGGCCAATGGTCGCGTTTTCTGCAACAGACCTCGCCTACATAAGCCGCGGTGTTGA 1791 0.4149 MMEKADSVQKLYTRMRLWEFPDQYVIEPTDGSSGSYLAVSRKDGSIKLIDEIRECSTVRVPKIFTIYGVAGMLRLLEGSYLLAITGRECVGSYLGHPIFKVSSLKVFPCDCSLDNTPSEQQKKTEMDFSGILKVAEKTTGLFFSYDANLTLSTQRLNDLGDESRLLPLWRQAEPRFLWNNYLLEVLIENKLDPYLLPIVQGSFHHFEAAIGKDIIEITIIARRCTRRNGTRMWRRGADPDGYVANFVETEQIMQINGYTGSIVQVRGSIPVPWQQIVDLTYKPKYELLKHDEAPRVLERHFLDLRKKYGSVLAIDLVNEHGGEGRLCEKFGKTMQHVSGNDVRYLHFDFHHICGHIHFDRLSILYDQISDFLERNGYLLLNEKGEKMKEQLGVVRTNCIDCLDRTNVTQSMIGRNMLEFQLRRIGIFGAEETISSHPNLDDNFKILWANHGDDISTQYTGTPALKGDFVRFGHRTMQGIINDGVNALMRYYLNNFCDGTKQDSIDLLQGHFIVSANREQTPSQSQGIEAIASFPLALGLVLTGFFFTTMSLTQVRYDFKHLFFSLLWASISVGIAAFVKANGRVFCNRPRLHKPRC* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2772 596 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC6 10 595 IPR030069 GO:0052866
Pvu3g2772 596 Pfam SacI homology domain 67 353 IPR002013 GO:0016791
Pvu3g2772 596 ProSiteProfiles Sac phosphatase domain profile. 132 460 IPR002013 GO:0016791
Pvu3g2772 596 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 10 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2772 Pvu-Chr3 49549132 49565122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2772 2 595 Acyl Lipid Metabolism Gene Families AT3G51460 71.692 0.0 928
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2772 K21797 - gmx:100796999 1055.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2772 3 49549132 49565122 Pvu3g2772 3 49549132 49565122 ECH
Pvu2g1194 2 23492366 23504586 Pvu3g2772 3 49549132 49565122 PCT