Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1194 ATGATGTTAAAGACCTCTTATCAACCTCCACGTGTAAGGAGCACACACTTCCCCTGGCTCCGTTTCCGCGGAACCGGTCCAAGTTTCAGTCCTAAAGCCGCATTTGGACACCACCAATTTGAACAAGGATTTGGCCCATCGCAATCCTGCCCCGTTCCGAAGCTTCCAAACACGCCGTTAGCTTTAAAAAGAAAAAAAAAGAATATAGCACGTTGGAGCATCATTCCTTTTTCGTTGCAGACCCTCACTTCATGTATTAAGAGCCCAACGCCAATTCGAATTTGGGTCTTAACTTTCACTTCGTTCTTCGATCTTGCCAACCAGCGAGTTCGAGTTTCAATAATGATGGAGAAGGCAGATTCTGTGCAGAAGCTGTATGCGCGCATGCGGCTCTGGGAATTTCCGGATCAGTATGTGATTGAGCCTACGGATGGATCTTCTGGTTCTTCTTTGGCTGTTAATCGAGTCGATGGATCCATGAAGCTCATCGATGAGGTTCCGGAATGCAGCTCGCTTCGTGTTCCTAAGATATATACAATTTTTGGTGTTGTAGGGATGTTGAGGCTATTGGCTGGATCATATTTGCTGGTTATAACTGAGCGTGAATCTGTTGGATCTTACTTGGGGCATCCAATTTTCAAAATTTCTTCATTGAAGGTTTTTCCATGTGACAATTCTCTTAAAAACACCCCTGCTGAACAGAAGAAAATAGAGATGGAATTTTCTGCGCTGCTTAATGTTGCTGAGAAGAGCTCTGGTCTGTTCTTCTCATATGAAACTAATTTAACTCTGAGTGCACAGCGGTTGAATGACTTGGGTGATGAGTCTAGATTGCTTCCACTTTGGAGACAGGCAGAACCTCGATTCCTATGGAACAATTATATGTTAGAAGTGCTCATAGATAACAAGCTTGAACCATACTTGCTCCCCGTAGTCCAAGGCAGCTTTCATCACTATCAAGCAGCCATTGGGAAAGATATTATTGATGTCACTTTGATTGCTAGGAGATGCACAAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGATCCTGATGGTTATGTTGCCAATTTTGTGGAAACAGAACAGATTATGCAGTTTAATGGGTATACCGCTTCATTTGTTCAGGTGCGTGGTTCAATCCCACTCCTCTGGCAGCAAATCGTTGATTTAACTTATAAACCGAAGTTTGAGTTGTTGAAACCTGAGGAGGCTCCACGAGTCCTAGAGAGGCATTTCTTAGATTTAAGGAAAAAATACGGGGCTGTATTAGCTGTTGATCTTGTTAACAAGCACGGAGGAGAAGGGCGATTGTGTGAAAAATTTGGTGAAACAGTGCAGCATGTGGCTAGCAATGATGTAAGATATCTGCACTTTGATTTTCACCATATCTGTGGGCACGTTCATTTCGATCGTCTCTCAATCCTTTATGAACAAATTTCAGATTTTCTGGAGAGAAACGGATATCTTCTGCTGAATGAAAAGGGAGAGAAAATGAAGGAACAGCTTGGAGTTGTTAGGACCAATTGTATTGATTGTCTAGACCGTACAAATGTAACTCAGAGCATGATAGGTCGAAATATGTTGGAATATCAGCTTAGAAGGCTTGGTGTCTTTGGTGCTGAAGAAACCATTAGTTCACACCCAAATCTGGATGAAAGCTTTAAGATCTTGTGGGCTAATCATGGGGATGATGTAAGCATTCAATACTCAGGAACTCCTGCTCTTAAAGGAGACTTTGTCAGGTTTGGGCACCGCACAGTTCAAGGGATAATACAAGATGGCTGTAATGCTCTTCTACGATATTATTACAATAACTTTCGTGATGGAACAAAGCAGGATGCAATTGATCTCATACAAGGACATTATATAGTTTCTGTCAGCCGAGATGCAGCTGCCAGTTCTCAGAAAGGAGGCCTTGATGCTATAGCTTCATTTCCCATGGCTTTTGCTCTGGTTTTGACTGGATTCCTCTTTGCAACCATGTCCTTGAGGCAAGTGCGATACGATTTTCGGCATTTCTTCTTTTCACTAATGTGGGCGGGCATTAGTGTCGGTATAGCAGCATTTGTGAGGGCCAACGGCCGTGTTTTCTGCAACAGACCTCGCCTACACAATCCCCGGTGA 2130 0.4324 MMLKTSYQPPRVRSTHFPWLRFRGTGPSFSPKAAFGHHQFEQGFGPSQSCPVPKLPNTPLALKRKKKNIARWSIIPFSLQTLTSCIKSPTPIRIWVLTFTSFFDLANQRVRVSIMMEKADSVQKLYARMRLWEFPDQYVIEPTDGSSGSSLAVNRVDGSMKLIDEVPECSSLRVPKIYTIFGVVGMLRLLAGSYLLVITERESVGSYLGHPIFKISSLKVFPCDNSLKNTPAEQKKIEMEFSALLNVAEKSSGLFFSYETNLTLSAQRLNDLGDESRLLPLWRQAEPRFLWNNYMLEVLIDNKLEPYLLPVVQGSFHHYQAAIGKDIIDVTLIARRCTRRNGTRMWRRGADPDGYVANFVETEQIMQFNGYTASFVQVRGSIPLLWQQIVDLTYKPKFELLKPEEAPRVLERHFLDLRKKYGAVLAVDLVNKHGGEGRLCEKFGETVQHVASNDVRYLHFDFHHICGHVHFDRLSILYEQISDFLERNGYLLLNEKGEKMKEQLGVVRTNCIDCLDRTNVTQSMIGRNMLEYQLRRLGVFGAEETISSHPNLDESFKILWANHGDDVSIQYSGTPALKGDFVRFGHRTVQGIIQDGCNALLRYYYNNFRDGTKQDAIDLIQGHYIVSVSRDAAASSQKGGLDAIASFPMAFALVLTGFLFATMSLRQVRYDFRHFFFSLMWAGISVGIAAFVRANGRVFCNRPRLHNPR* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1194 709 Pfam SacI homology domain 181 466 IPR002013 GO:0016791
Pvu2g1194 709 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC6 124 709 IPR030069 GO:0052866
Pvu2g1194 709 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 124 709 - -
Pvu2g1194 709 ProSiteProfiles Sac phosphatase domain profile. 245 573 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1194 Pvu-Chr2 23492366 23504586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1194 116 709 Acyl Lipid Metabolism Gene Families AT3G51460 74.832 0.0 980
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1194 K21797 - gmx:100796999 1150.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1194 2 23492366 23504586 Pvu2g1194 2 23492366 23504586 ECH
Pvu2g1194 2 23492366 23504586 Pvu3g2772 3 49549132 49565122 PCT