Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2767 ATGGCGAGAAGATCCCTACCGCTCCTCAAGGACCTCATCACGCGCTCCTCGCCCAATCGGATCACCGCCCGATCCGTCACCTACATGCACCGTCCGGGCGACGGGACGCCGCGGCCGGTGACGCTCATCCCGGGCGACGGGATTGGGCCGATGGTGACGGGCGCGGTTGAGCAGGTGATGGAGGCGATGCACGCGCCGGTGTACTTTGAGAAGTTCGATGTCCACGGGAACATGAAGGTGATTCCGCAGGACGTGCTGGAGTCGATTCGGAAGAACAAGGTGTGTCTCAAGGGTGGCCTCGTCACCCCCATGGGCGGCGGCGTCAGTTCCCTCAACGTGCAGCTCCGGAAGGAGCTCGATCTATACGCCTCCCTCGTCAACTGCTTCAACCTCCCCGGCTTGGCCACGCGCCACGATAACGTCGACATCGTCGTCATCAGGGAGAACACCGAGGGCGAGTACTCCGGACTCGAACACGAGGTCGTTCCCGGCGTCGTCGAAAGCCTTAAGGTAATTACGAAGTTCTGTTCAGAGCGTATTGCAAAATATGCATTCGAGTATGCTTACCTGAACAACAGAAAGACCGTGACTGCTGTGCACAAAGCAAATATTATGAAGCTTGCGGATGGTTTATTTTTGGAATCTTGTCGAGAGGTTGCCACAAAATACCCCGGAATCAAGTATAACGAAATTATTGTGGATAACTGCTGCATGCAGCTTGTTTCAAAGCCTGAGCAGTTTGATGTTATGGTGACCCCAAATCTTTATGGAAATCTAATTGCAAATACTGCAGCAGGCATTGCTGGAGGTACTGGAGTTATGCCAGGAGGTAATGTTGGAGCCGAGCACGCTGTGTTTGAGCAAGGTGCTTCAGCAGGAAATGTTGGTAATGAACAAGTATTAGAGCAAAAGGTTGCCAATCCAGTGGCTCTTCTTCTCTCGTCAGCTATGATGCTTAGGCATCTTCAGTTTCCTGCCTTTGCTGACCGTTTGGAAACTGCTGTGGAACATGTCATTCTGGACGGCAAATACCGAACAAAGGATCTTGGAGGGTCAAGCACCACCCAAGAGGTTGTGGATGCAGTTATAAATGCTTTAGATTGA 1104 0.5254 MARRSLPLLKDLITRSSPNRITARSVTYMHRPGDGTPRPVTLIPGDGIGPMVTGAVEQVMEAMHAPVYFEKFDVHGNMKVIPQDVLESIRKNKVCLKGGLVTPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLATRHDNVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKTVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLIANTAAGIAGGTGVMPGGNVGAEHAVFEQGASAGNVGNEQVLEQKVANPVALLLSSAMMLRHLQFPAFADRLETAVEHVILDGKYRTKDLGGSSTTQEVVDAVINALD* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2767 367 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 37 366 - -
Pvu3g2767 367 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 2 365 - -
Pvu3g2767 367 SMART Iso_dh_2 39 362 IPR024084 -
Pvu3g2767 367 PANTHER NAD-DEPENDENT ISOCITRATE DEHYDROGENASE C,1 2 365 - -
Pvu3g2767 367 TIGRFAM mito_nad_idh: isocitrate dehydrogenase, NAD-dependent 36 366 IPR004434 GO:0006099
Pvu3g2767 367 Pfam Isocitrate/isopropylmalate dehydrogenase 40 362 IPR024084 -
Pvu3g2767 367 Gene3D Isopropylmalate Dehydrogenase 22 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2767 Pvu-Chr3 49516814 49520645 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2767 K00030 - gmx:100777867 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2767 3 49516814 49520645 Pvu3g2767 3 49516814 49520645 ECH
Pvu2g1184 2 23295216 23299974 Pvu3g2767 3 49516814 49520645 PCT