Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2766 ATGTTCTGGACTCGTTCTCTCAGACTTTTCAGATCCTCTCGCGTCTTCTCGTCTCACTATCATTCGCGTAAATTTTGTAGCTTTTCGCAGGACAATGATCTGGGTTCATGGGAATCGATGGAGGGTCTTTCTCGTTGCTCTGCCAATTTTGTTCCTTTGTCTCCCATCACCTTCCTAGAGCGAGCAGCCAAGGTCTGCAGAGACAGAACCTCGCTCGTCTATGGATCTCTTCAGTATAACTGGGGCCAAACCCATCAACGCTGCTTGAAACTCGCTTCTGCTTTGACCCTCTTGGGAATTTCTCGCGGGGATGTGGTTGGCACCCTATTACCCAATGTCCCTGCTATGTACGAGTTACATTTTGCTGTCCCAATGGCTGGAGCCATTCTATGCACCCTTAACTCACGCTTAGATGTAGCTATGGTTTCAGTCCTTTTGGAGCATTCACAAGCAAAGGTCCTTTTTGTAGACTACCAACTCCTTGAAGTTGCTAGGGGAGCTTTGGACTTGCTAGGCAAAAAAGCTAGAGAATTGCCAATTTTGGTTTTAGTCACAGACTCGGATTGTCCATCTACATTTGACATTACATCAGTTAGTTATGAGTATGAGAGGCTTCTAGCTGATGGGCACAATGGTTTTGACATAGTGAGACCCCGTAGTGAATTGGATCCTGTAAGTATAAACTACACCTCAGGCACTACATCTAGGCCTAAGGGAGTTGTCTACAGTCACAGGGGTGCTTATCTTAATTCTCTAGCAACTGTTCTACTCTTTAGAATGGACCTTTTTCCTGTTTATCTTTGGAATGTTCCAATGTTCCACTGCAATGGGTGGTGCCTCCCATGGGGAGTGGCATCACAATTTGGGATCAATATTTGTGTTAGGAAGGTCTCTCCAAAAAACATTTTTGACAATATAGCTCGGCATAAGGTGACACACATGGCAGGAGCACCAACTGTGCTGAACATGATTGTGAACTCTGCATTGACCGACCGAAAGCAACTCAATCAGAAGGTGGTGGTGATGACAGGAGGTTCACCTCCACCGCCACAGATCCTTGACAAGATGGAGGAGATTGGCTTTAGCATTTCTCATCTGTATGGCCTCACAGAAACGTATGGTCCAGGCACTTTCTGTGCTTGGAGACCCGAGTGGGACCTTTTGCCCCATGAAGATAGATCAAAGATGAAAGCCAGGCAGGGGGTGCCCCATGTGGCTTTGGAGGAGATTGATGTGAAAGATCCTGCCTCAATGGAAAGTGTTCCATCTGATGGAAAAACAATGGGAGAGGTAATGTTTAGAGGGAATACAGTGATGAGTGGATATTTTAGAGATTTGAAAGCAACAGAAGAAGCTTTCAGAGATGGGTGGTTTCGTAGTGGGGATCTAGCTGTGAAACACTCTGATGGTTACATAGAAGTCAAGGACAGGTTGAAGGACATAATAATCTCTGGGGGAGAGAATATCAGCTCAGTGGAGGTAGAGACGGTTTTGTATAGCCATCCAGCAATTCTTGAAGCTGCAGTTGTTGCCAGGCCTGATGATCATTGGGGCCAAACTCCTTGTGCTTTTGTGAAGTTGAAAGAGGGGTTTGATGTAAATGCTCAAGACATAATCAACTTTAGCAGGGATCATTTGCCTCATTACATGGCTCCTAAAACAGTCGTTTTTCAAGACATTCCAAAAACTTCAACCGGGAAGATACAGAAGTATGTTCTGAGGGAGAAAGCCGAAGCTTTGGGCAGCCTTTCTAGACCCCATGGGTGTGATAAATTGTAG 1779 0.4547 MFWTRSLRLFRSSRVFSSHYHSRKFCSFSQDNDLGSWESMEGLSRCSANFVPLSPITFLERAAKVCRDRTSLVYGSLQYNWGQTHQRCLKLASALTLLGISRGDVVGTLLPNVPAMYELHFAVPMAGAILCTLNSRLDVAMVSVLLEHSQAKVLFVDYQLLEVARGALDLLGKKARELPILVLVTDSDCPSTFDITSVSYEYERLLADGHNGFDIVRPRSELDPVSINYTSGTTSRPKGVVYSHRGAYLNSLATVLLFRMDLFPVYLWNVPMFHCNGWCLPWGVASQFGINICVRKVSPKNIFDNIARHKVTHMAGAPTVLNMIVNSALTDRKQLNQKVVVMTGGSPPPPQILDKMEEIGFSISHLYGLTETYGPGTFCAWRPEWDLLPHEDRSKMKARQGVPHVALEEIDVKDPASMESVPSDGKTMGEVMFRGNTVMSGYFRDLKATEEAFRDGWFRSGDLAVKHSDGYIEVKDRLKDIIISGGENISSVEVETVLYSHPAILEAAVVARPDDHWGQTPCAFVKLKEGFDVNAQDIINFSRDHLPHYMAPKTVVFQDIPKTSTGKIQKYVLREKAEALGSLSRPHGCDKL* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2766 592 CDD ttLC_FACS_AEE21_like 50 575 - -
Pvu3g2766 592 PANTHER ACYL-ACTIVATING ENZYME 19 583 - -
Pvu3g2766 592 Pfam AMP-binding enzyme 60 484 IPR000873 -
Pvu3g2766 592 Gene3D - 44 478 IPR042099 -
Pvu3g2766 592 Pfam AMP-binding enzyme C-terminal domain 493 567 IPR025110 -
Pvu3g2766 592 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Pvu3g2766 592 SUPERFAMILY Acetyl-CoA synthetase-like 41 578 - -
Pvu3g2766 592 Gene3D - 479 580 IPR045851 -
Pvu3g2766 592 PANTHER ACYL-ACTIVATING ENZYME 2-RELATED 19 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2766 Pvu-Chr3 49509748 49513063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2766 116 585 Miscellaneous Gene Families AT1G20560 62.076 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2766 - - gmx:100500429 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2766 3 49509748 49513063 Pvu3g2766 3 49509748 49513063 ECH
Pvu2g1182 2 23251016 23256546 Pvu3g2766 3 49509748 49513063 PCT