Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1182 ATGGCAGGGGGTGTTCTTTCTGCGCTGAATACCCAATTGGATGTGACAGCATTGGCTCTGATATTGGAACAATTAGAGCCATGCAAAATCATGTTTGTGGACTACCAGTTCATTGATTCTGCTCTCAAAGCATGTGAAATTCTATACCAGAGGAAATGCAAGCCACCCCATATTGTCCTAATACCACGTTATGATCTAGAACCATCTTTCTCAGTGAAGGATATCTCCCCAGGTACCTTAAACTACAATGAACTTCTTGCAACTGGACAAAAGGATTTTGAGACTTTGAAACCAAGCAATGAATGCAATCCCATATCAGTGAACTACACCTCAGGCACCACAGGGACCCTTCCTAAAGGGGTTGTGTATAGTCATAAAGGTGCTTATCTTAATTCACTTGCAGCAATTGCTCGTTTTGAGATGAAACAAATGGCAGTGTTCCTATGGACAGTTGACATGTTTCGTTGCAATGGATGGTGCTTTCCTTGGGTCATGCCTGCTATTGGTGGCACCAATATTTGCCTAAGGAATGTCTCAGCAAAAAGCATATTTGATGCAATTCACCGTTACAAGGTAACTCATTTTTGTGGCGCACCTACCCTTTTGGACATGATTGCAAATACATCACCCTGTGACCAGAGGCCTCTTCCTCATAGGGTGAAAGCCACAGTTGCTGGTGTGCTACCACCTATCCATGTTCTTAACAAGGTGTCACAACTGGGATTTGATGTGAACATAGGATATGGTATGACAGAGACTTATGGTCCTTTCATTGTTAGACCATGGAACCCCACTTCAGACAGTGAACATACAAAGTTGAATTATGGTATGTCAGGGTTTATGCAAAACGTTGATGTGAAGGATCCAAAGACTAATGAAAGTACACCTTGTGATGGGAAAACCATAGGTGAAATTGTGTTCAAAGGGGATGCATTGATGGTGGGGTACCTTAAGAATCCGGAAGCAACTAAAGAGGCTATTAGGGATGGATGGTATATGACTGGGGACCTTGGGGTTAGACAACCAAATGGTTCCATAACAATGAAGGATAGAAGAAAGGATATTATGTACTGTAAGGGAGAGGCTGTGAGCTCACTAGAGGTGGAAGCAGTGTTGTTGAATCATCCAAAGGTTTTGAAAGCTGCTGTTGTGGGGAGATGTGATGAATACTTGTTGGAATCACCATTTGCAATTGTCAAATTGAGGGAGGGATGTAGTGCCACTGTTGAAGAAGTCATCAAGTTCTGTGAAGATCATTTGGCTAGTCATATGGTTCCAAGGAGTGTGGTATTTGGAGATTTACCTGTTAATTCAACTGGGAAGGTTCAGAAATTTCGAATCAGGGAGAAGATCAAAAGCGAGAATGGTGTTACTCAATGA 1380 0.4232 MAGGVLSALNTQLDVTALALILEQLEPCKIMFVDYQFIDSALKACEILYQRKCKPPHIVLIPRYDLEPSFSVKDISPGTLNYNELLATGQKDFETLKPSNECNPISVNYTSGTTGTLPKGVVYSHKGAYLNSLAAIARFEMKQMAVFLWTVDMFRCNGWCFPWVMPAIGGTNICLRNVSAKSIFDAIHRYKVTHFCGAPTLLDMIANTSPCDQRPLPHRVKATVAGVLPPIHVLNKVSQLGFDVNIGYGMTETYGPFIVRPWNPTSDSEHTKLNYGMSGFMQNVDVKDPKTNESTPCDGKTIGEIVFKGDALMVGYLKNPEATKEAIRDGWYMTGDLGVRQPNGSITMKDRRKDIMYCKGEAVSSLEVEAVLLNHPKVLKAAVVGRCDEYLLESPFAIVKLREGCSATVEEVIKFCEDHLASHMVPRSVVFGDLPVNSTGKVQKFRIREKIKSENGVTQ* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1182 459 Pfam AMP-binding enzyme 1 356 IPR000873 -
Pvu2g1182 459 Gene3D - 1 353 IPR042099 -
Pvu2g1182 459 PANTHER ACYL-ACTIVATING ENZYME 1 453 - -
Pvu2g1182 459 Gene3D - 354 456 IPR045851 -
Pvu2g1182 459 PANTHER FATTY ACYL-COA SYNTHETASE FAMILY PROTEIN 1 453 - -
Pvu2g1182 459 Pfam AMP-binding enzyme C-terminal domain 367 441 IPR025110 -
Pvu2g1182 459 SUPERFAMILY Acetyl-CoA synthetase-like 1 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1182 Pvu-Chr2 23251016 23256546 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1182 1 453 Miscellaneous Gene Families AT1G20560 50.870 4.00e-160 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1182 - - pvu:PHAVU_002G114400g 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1182 2 23251016 23256546 Pvu2g1182 2 23251016 23256546 ECH
Pvu2g1182 2 23251016 23256546 Pvu3g2766 3 49509748 49513063 PCT