Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2763 ATGGGTGACATGAAACTGTGTTCTTTGATGCTATGCTTGTTGCTGGCAATGTTGATGCTTGGGGCCAGAGCGCAACAATGTGGTAGACAAGCTGGTGGCGCATTGTGCGCAAATAGGTTATGTTGCAGCCAACATGGGTGGTGCGGAAGCACCAGCGAATACTGTGGAACAGGTTGCCAGAGCCAATGCCAAGCTAGTGGCGGCGGCGGAGATGTCAGCAGCATCATCAGCCTTTCTATGTTCGAGGAAATGCTAAAGCACCGGAACGATGCAGCATGTCCCGGGCGTGGATTCTACACCTATGAAGCTTTTCTCACTGCTGCTAGATCGTTCAACGGCTTTGGCACTTCAGGTGATGACACCACTCGCAAAAGGGAGCTTGCAGCTTTCTTCGCTCAAACGTCTCATGAAACCACAGGGGGGTGGCCAAGTGCACCAGACGGTCCATACTCGTGGGGATATTGTTTCATCAACGAACGGAACCAGGATGTTTATTGCAATGGTGGAGGATGGCCATGTGCTGCTGGTAAAAGATATTATGGACGAGGACCAATCCAACTCACACACAACTACAATTATGGGCTAGCTGGAAGAGAACTTAGTTTGGATTTGACGAATGATCCGGATCTAGTGGGAAGAGACAGAGTTGTGGCGTTCAGAACAGCCATATGGTTTTGGATGAGGGCACAAGGAAACAAGCCATCGTCTCATAATGTGATTATCGGAGCATGGAGCCCATCTAGTGCTGACACGCAAGCCAGGCGGGCTCCCGGGTTTGGTGTGATCACCAACATAATAAACGGGGGACTGGAATGCGGGCGCGGGCCGGATCCGAGGGTCCAAAGTCGGATCGGGTTCTACCAGAGGTACTGTCAGATGCTGGGTGTGAGCCCAGGAAACAATTTGGACTGCAACAATCAAACCCCCTTTTAA 933 0.5123 MGDMKLCSLMLCLLLAMLMLGARAQQCGRQAGGALCANRLCCSQHGWCGSTSEYCGTGCQSQCQASGGGGDVSSIISLSMFEEMLKHRNDAACPGRGFYTYEAFLTAARSFNGFGTSGDDTTRKRELAAFFAQTSHETTGGWPSAPDGPYSWGYCFINERNQDVYCNGGGWPCAAGKRYYGRGPIQLTHNYNYGLAGRELSLDLTNDPDLVGRDRVVAFRTAIWFWMRAQGNKPSSHNVIIGAWSPSSADTQARRAPGFGVITNIINGGLECGRGPDPRVQSRIGFYQRYCQMLGVSPGNNLDCNNQTPF* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2763 310 SUPERFAMILY Lysozyme-like 71 310 IPR023346 -
Pvu3g2763 310 SMART ChitinBD_3 26 63 IPR001002 GO:0008061
Pvu3g2763 310 PANTHER CHITINASE-RELATED 7 310 - -
Pvu3g2763 310 Gene3D - 80 310 - -
Pvu3g2763 310 ProSitePatterns Chitinases family 19 signature 1. 93 115 IPR000726 GO:0004568|GO:0006032|GO:0016998
Pvu3g2763 310 ProSiteProfiles Chitin-binding type-1 domain profile. 24 65 IPR001002 GO:0008061
Pvu3g2763 310 PIRSF Endochitinase 3 310 IPR016283 GO:0004568|GO:0005975
Pvu3g2763 310 SUPERFAMILY Plant lectins/antimicrobial peptides 26 66 IPR036861 GO:0008061
Pvu3g2763 310 Pfam Chitinase class I 75 304 IPR000726 GO:0004568|GO:0006032|GO:0016998
Pvu3g2763 310 CDD chitinase_GH19 76 304 - -
Pvu3g2763 310 PANTHER CHITINASE (CLASS IB) / HEVEIN 7 310 - -
Pvu3g2763 310 Pfam Chitin recognition protein 26 63 IPR001002 GO:0008061
Pvu3g2763 310 ProSitePatterns Chitin recognition or binding domain signature. 36 55 IPR018371 GO:0008061
Pvu3g2763 310 CDD ChtBD1_GH19_hevein 25 63 - -
Pvu3g2763 310 ProSitePatterns Chitinases family 19 signature 2. 217 227 IPR000726 GO:0004568|GO:0006032|GO:0016998
Pvu3g2763 310 Gene3D Endochitinase, domain 2 158 213 - -
Pvu3g2763 310 PRINTS Chitin-binding domain signature 34 42 IPR001002 GO:0008061
Pvu3g2763 310 PRINTS Chitin-binding domain signature 42 49 IPR001002 GO:0008061
Pvu3g2763 310 PRINTS Chitin-binding domain signature 49 56 IPR001002 GO:0008061
Pvu3g2763 310 Gene3D - 24 65 IPR036861 GO:0008061
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2763 Pvu-Chr3 49471168 49472685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2763 24 310 Glycoside Hydrolase AT3G12500 67.687 5.89e-141 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2763 K20547 - gmx:100779462 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2763 3 49471168 49472685 Pvu3g2763 3 49471168 49472685 ECH
Pvu2g1179 2 23180424 23182177 Pvu3g2763 3 49471168 49472685 PCT