Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2663 ATGCTGTCTCTCACACTCACTTTTCTAACACTCTCACTTTTCCTAACCTCATTGGTTACTGATTCAGCCACGCATTGGGACGACACGCAGCTTTTGAAGGAACTGAAGAACAACCTTAACGCTGCTTCCGTCACCCCAGGCTCCTGCATCTACTCATGGGACTTCTCCTTTGATCCCTGCGACAACCTCTTCAGTGACAAGTTCACCTGCGGCTTCAGGTGCGACGCCGTCGTTTCGGGAACCTCTCGACTCACCGAACTCACACTCGACCCCGCCGGTTACACCGGCACTCTCCCCGCCGCCTGGAACCTCCCCTACCTCCAAACTCTCGACGTCTCAAACAACTTCTTTTCGGGCCAAATCCCCGAGTCATTCTCCAACCTCACGCGGTTAACTCGACTCGGTTTATCCAAAAACTCCCTCACCGGAACCATACCCTCTTCCTTATCCTCCCTCTCAAACCTCCAAGAGCTTTACCTCGACAACAACAACCTCCAAGGACCAATCCCCGTTACTTTTAACGCCCTCACCAACCTTCAACGCCTCGAAATGCAGTCCAACAAGCTAAACGGCGTCGTTCCCAGTTTGAGCTCTCTGAAGAGTCTTTACTACTTGGACCTCAGCTTCAATTTTTTCGGCGGAGGGTTCCCCTCCGCGTTGCCCGAATCTCTGATTCAGATTTCAATGCGGAACAACAGCTTAAGCGGCGCGTTGGAACCCGAATCTCTGAGGAGCTTGAACTCCCTGCAAGTGGTGGATTTGAGTGGCAACGGGTTCAGCGGTGCCGTTCCGTTTGCTCTCTTCGAGCTTCCTTCGTTGCAGCAGGTGACGCTCTCGTTCAACAAGTTCTCGCAGGTGGAAGTGCCTTCTTACAGTTTGGAAATGCGAAGCGGGGTTATCGCCGTTGATCTGAGTGACAACGAGCTTGGGGGGTTTCTGCCGTTGTTCCCGGCGTTGATGCCGAGGCTTTCGTCTTTGTCGTTGGAGAACAACAAGTTCGTGGGAATGATTCCGACCCAGTACGCGTTGAAGACGGTTTTCCCCGAGGCTGGGATGGCTCCGTTCCAGAGGCTTCTGTTGGGAGGGAATTACTTGTTCGGAGCTATTCCGAGTGCTCTAATGGCGCTTCAACCGGGTTCTGCCATGGTGCAAAGTATTGTCATTTTCATGAAGTGA 1176 0.5281 MLSLTLTFLTLSLFLTSLVTDSATHWDDTQLLKELKNNLNAASVTPGSCIYSWDFSFDPCDNLFSDKFTCGFRCDAVVSGTSRLTELTLDPAGYTGTLPAAWNLPYLQTLDVSNNFFSGQIPESFSNLTRLTRLGLSKNSLTGTIPSSLSSLSNLQELYLDNNNLQGPIPVTFNALTNLQRLEMQSNKLNGVVPSLSSLKSLYYLDLSFNFFGGGFPSALPESLIQISMRNNSLSGALEPESLRSLNSLQVVDLSGNGFSGAVPFALFELPSLQQVTLSFNKFSQVEVPSYSLEMRSGVIAVDLSDNELGGFLPLFPALMPRLSSLSLENNKFVGMIPTQYALKTVFPEAGMAPFQRLLLGGNYLFGAIPSALMALQPGSAMVQSIVIFMK* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2663 391 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 3 384 - -
Pvu3g2663 391 SUPERFAMILY L domain-like 47 375 - -
Pvu3g2663 391 Pfam Leucine rich repeat 105 165 IPR001611 GO:0005515
Pvu3g2663 391 Gene3D Ribonuclease Inhibitor 195 382 IPR032675 -
Pvu3g2663 391 Gene3D Ribonuclease Inhibitor 27 194 IPR032675 -
Pvu3g2663 391 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 3 384 - -
Pvu3g2663 391 SMART LRR_typ_2 128 151 IPR003591 -
Pvu3g2663 391 SMART LRR_typ_2 176 199 IPR003591 -
Pvu3g2663 391 SMART LRR_typ_2 104 127 IPR003591 -
Pvu3g2663 391 SMART LRR_typ_2 270 293 IPR003591 -
Pvu3g2663 391 SMART LRR_typ_2 152 175 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2663 Pvu-Chr3 48695085 48699364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2663 96 338 Miscellaneous Gene Families AT4G39270 39.919 1.62e-35 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2663 - - gmx:100787530 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2663 3 48695085 48699364 Pvu3g2663 3 48695085 48699364 ECH
Pvu3g2663 3 48695085 48699364 Pvu2g1158 2 22859492 22860745 ECH
Pvu2g1158 2 22859492 22860745 Pvu3g2663 3 48695085 48699364 PCT