Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1158 ATGGGGTCTCTCTGTGTCCCTCTATCTACGATCATCGCAATTTGGTGTCTATTATTGGGTGCTGAATCGAAGACACATTGGGGAGATGCAGAGGTTCTCAAGGAGTTAAAGCAAGGTTTGGAACAAGCTTCGGTGATCCCAGGCTCTTGCGTCAGTTCCTGGGACTTCACCCTCGACCCCTGCGACAACCTATTCGCCGACAAATTCACGTGCGGCTTCAGATGCGACGTCGTCGTTTCAGGCCTTAGTCGAGTCACTGAACTTGCGCTGGACCAAGCGGGTTATGTTGGCTCTCTCACCTTCACGTGGAACCTTCCTTTTCTACAAACACTCGATCTCTCCAAAAACAACTTCTCCGCCCAAATTCCTGATTCCTTTTCAAACCTAACTCGCCTCCGCCGACTCAGTCTCTCGTCCAACTCCTTCTCCGGCGAGATACCCCCTTCCCTCGGCACACTCCCCAGCCTCGAAGAGCTTTACCTCGACAGCAACAACCTACGAGGAACAATCCCACAAGGCTTCCACAACCTTAAAAGACTCGAACTCCAATCCAACAATCTCAACACCCACCTACCAAACTTTGACACATTCACAAACCTTAAATACCTCGATTTCAGCGATAACTCCATCGCGGGAGAGTTATCGGCCTCGCTCCCTGTCTCGCTGGTTCAGATATCAATTCGGAACAACAATTTAAACGGTGTCTTATCGAGTGAAAGCTTCAGGAATTTGAAGAGGTTGCAGGTGGTGGATTTCAGCTCCAACCGAATGAGTGGTTTAATTCCTTCGGTTTTCTTCGAGCTTCCGTCGTTGCAGCAGTTGACGCTGTCCTTCAACGAGTTCACGAAGGTTGAAGCACCTTATAAGGGAGTGGAGTCGCGGAGCAGACTTATAGCGGTTGATTTGAGCAACAACAGGCTTGAGGGGTTTTTGCCGTCATTCATGGCGATGATGCCGAAGTTATCGTCGTTGTCCTTGGAGAATAACGAGTTCACAGGGCGAATAGCGACCCAGTTAGCGGAGAAAACGGTGTCTCCCAAAACGGGGGTGACTCCGTTGGAGAGGCTTCTGTTGAGGGGGAATTACTTGGTGGGAGGGATTCCTCGGCCCTTGTTAACATTGAAACGCGATTCTGCGAACGTGAGTTTAGTGGATAACTGCTTGTACAGGTGTCCTCATACTTTCTTTTTCTGCCAAGGTGGACAACAGAAGTCATTGGCACAGTGTAACAGATTTGTCTCAACTACTGAATAA 1254 0.4936 MGSLCVPLSTIIAIWCLLLGAESKTHWGDAEVLKELKQGLEQASVIPGSCVSSWDFTLDPCDNLFADKFTCGFRCDVVVSGLSRVTELALDQAGYVGSLTFTWNLPFLQTLDLSKNNFSAQIPDSFSNLTRLRRLSLSSNSFSGEIPPSLGTLPSLEELYLDSNNLRGTIPQGFHNLKRLELQSNNLNTHLPNFDTFTNLKYLDFSDNSIAGELSASLPVSLVQISIRNNNLNGVLSSESFRNLKRLQVVDFSSNRMSGLIPSVFFELPSLQQLTLSFNEFTKVEAPYKGVESRSRLIAVDLSNNRLEGFLPSFMAMMPKLSSLSLENNEFTGRIATQLAEKTVSPKTGVTPLERLLLRGNYLVGGIPRPLLTLKRDSANVSLVDNCLYRCPHTFFFCQGGQQKSLAQCNRFVSTTE* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1158 417 Gene3D Ribonuclease Inhibitor 28 195 IPR032675 -
Pvu2g1158 417 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 8 413 - -
Pvu2g1158 417 SMART LRR_typ_2 268 289 IPR003591 -
Pvu2g1158 417 SMART LRR_typ_2 105 128 IPR003591 -
Pvu2g1158 417 SMART LRR_typ_2 174 199 IPR003591 -
Pvu2g1158 417 SMART LRR_typ_2 244 267 IPR003591 -
Pvu2g1158 417 SMART LRR_typ_2 129 153 IPR003591 -
Pvu2g1158 417 SMART LRR_typ_2 318 346 IPR003591 -
Pvu2g1158 417 Pfam Leucine rich repeat 222 280 IPR001611 GO:0005515
Pvu2g1158 417 Pfam Leucine rich repeat 108 166 IPR001611 GO:0005515
Pvu2g1158 417 SUPERFAMILY L domain-like 70 402 - -
Pvu2g1158 417 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 8 413 - -
Pvu2g1158 417 Gene3D Ribonuclease Inhibitor 196 404 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1158 Pvu-Chr2 22859492 22860745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1158 79 412 Receptor kinase-like Gene Family AT3G28890 29.206 5.90e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1158 - - gmx:100811366 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1158 2 22859492 22860745 Pvu2g1158 2 22859492 22860745 ECH
Pvu3g2663 3 48695085 48699364 Pvu2g1158 2 22859492 22860745 ECH
Pvu2g1158 2 22859492 22860745 Pvu3g2663 3 48695085 48699364 PCT