Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2590 ATGATTAAACTATTTAAAGTCAAGGAGAAGCAGAGAGAACAAGCAGAGAATGCAAGTGGAGGACCACCTGTTAAGAAGCAATCAGCTGGGGAGTTGCGTCTTCACAAAGACATAAGTGAGTTGAATCTGCCAACATCTTGTGTCATACGATTTCCCAATGGCAAAGATGACCTGATGAACTTTGAAGTTTCAATCCAACCTGATGATGGATATTACATGGGTGGCACATTTTTGTTTACATTCCAAGTATCTCCCATCTATCCACACGAGGCACCAAAGGTTAAGTGCAAGACAAAGGTCTACCATCCAAATATAGACTTGGAAGGAAATGTTTGCCTTAACATCCTACGAGAAGATTGGAAACCTGTTCTCAATATAAACACAGTCATCTACGGATTGTATCATCTCTTCACGGAACCAAATTATGAGGATCCGCTGAATCATGACGCTGCTGCGGTCTTGAGAGAGAACCCGAAGTTGTTTGAGTCTAATGTGAGGAGGGCTATGGCTGGTGGGTATGTGGGGCAAACCTATTTCACTCGTTGTATGTAA 552 0.4239 MIKLFKVKEKQREQAENASGGPPVKKQSAGELRLHKDISELNLPTSCVIRFPNGKDDLMNFEVSIQPDDGYYMGGTFLFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNYEDPLNHDAAAVLRENPKLFESNVRRAMAGGYVGQTYFTRCM* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2590 183 CDD UBCc 33 167 IPR000608 -
Pvu3g2590 183 SUPERFAMILY UBC-like 18 180 IPR016135 -
Pvu3g2590 183 PANTHER - 10 173 - -
Pvu3g2590 183 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 29 174 IPR000608 -
Pvu3g2590 183 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 10 173 - -
Pvu3g2590 183 SMART ubc_7 32 174 - -
Pvu3g2590 183 MobiDBLite consensus disorder prediction 10 29 - -
Pvu3g2590 183 Pfam Ubiquitin-conjugating enzyme 33 168 IPR000608 -
Pvu3g2590 183 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 101 116 IPR023313 -
Pvu3g2590 183 Gene3D Ubiquitin Conjugating Enzyme 25 183 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2590 Pvu-Chr3 47918431 47921873 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2590 K10579 - gmx:100813186 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2590 3 47918431 47921873 Pvu3g2590 3 47918431 47921873 ECH
Pvu2g0270 2 2824225 2828536 Pvu3g2590 3 47918431 47921873 PCT