Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0270 ATGATTAAACTTTTTAAAGTAAAGGAAAAGCAGAGAGAACTTGCAGAAAATGCAGGTGGTGGACCACCCGTTAAGAAGCAAAGTGCTGGCGAGTTGCGTCTTCACAAAGACATAAGTGAGCTGAATCTACCACAATCTTGTACCATACATTTCCCCAATGGAAAAGATGACCTGATGAACTTCGAAGTTTCAATTCGACCCGATGACGGATATTACTTAGGTGGCACATTTTTGTTTTCCTTTCAAGTCTCTCCCATCTATCCACATGAAGCGCCAAAGGTTAAGTGCAAGACAAAGGTCTATCATCCAAATATTGACTTGGAAGGAAATGTTTGTCTCAACATCTTACGAGAAGATTGGAAACCTGTCCTTAATATAAACACTGTCATCTATGGCTTGTATCATCTCTTCACGGAACCAAATTACGAGGATCCACTGAATCACGATGCCGCTGCTGTGTTGAGAGAGAACCCAAGGTTGTTTGAATCTAACGTGAGGAGGGCAATGTCCTGA 513 0.4172 MIKLFKVKEKQRELAENAGGGPPVKKQSAGELRLHKDISELNLPQSCTIHFPNGKDDLMNFEVSIRPDDGYYLGGTFLFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNYEDPLNHDAAAVLRENPRLFESNVRRAMS* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0270 170 Gene3D Ubiquitin Conjugating Enzyme 25 170 IPR016135 -
Pvu2g0270 170 SMART ubc_7 32 169 - -
Pvu2g0270 170 CDD UBCc 33 167 IPR000608 -
Pvu2g0270 170 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 10 168 - -
Pvu2g0270 170 SUPERFAMILY UBC-like 23 169 IPR016135 -
Pvu2g0270 170 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 29 170 IPR000608 -
Pvu2g0270 170 PANTHER - 10 168 - -
Pvu2g0270 170 Pfam Ubiquitin-conjugating enzyme 33 168 IPR000608 -
Pvu2g0270 170 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 101 116 IPR023313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0270 Pvu-Chr2 2824225 2828536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0270 K10579 - gmx:100813186 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0270 2 2824225 2828536 Pvu3g2590 3 47918431 47921873 PCT