Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2589 ATGAGTGCCCTTAATTTCAACCCATGGCTACAACCCAGCTTCACCAGATCCAGATCCCTAACTTTTCTATTTCATGGCCTAACAAACTTCCCCATTCCCATTCTCATTCCCAAACGCCCAAGAGATAAGCCTTATTCATCCGCCACGTCTTTCACGCTATCCGCACTCCTCACCAAACAGGAGACGGTTCAGACGGAGGAAAAGCCGGCGTTCGACTTCAACTCCTACATGCTCCACCAAGCCCACGCCGTCAACCAGGCGCTCCACGACGCCGTTCCGCTCCGCGAGCCGCTGCGGATCCACGAGGCCATGCGCTACTCCCTCCTCGCCGGCGGAAAGCGCGTGCGCCCCGTCCTCTGCGTCGCCGCCTGCGAGCTTGTGGGCGGCTCCGCCGCCACCGCGATGCCCGCTGCCTGCGCCGTCGAGATGATCCACACCATGTCCCTCATCCACGATGACCTCCCCTGCATGGACAACGACGACCTCCGCCGCGGCAAGCCTACCAACCACAAGGTCTTCGGAGAGGACGTGGCAGTCCTCGCCGGCGACGCGCTCCTCGCATTCGCCTTCGAGCACATCGCCTGCGCTACCGTTGGTGCCTCCCCGCCTCGCATCGTCCGCGCCCTCGGTGAGCTCGCGCGCGCCATCGGCGCTGAGGGACTCGTCGCCGGCCAGGTGGTCGACATCAAATCCGAGGGGCTTGACAACGTCGGCCTCGAACGCTTGGAGTTCATCCATATCCACAAGACCGCAGCCCTGCTGGAGGGCGCGGTGGTCCTCGGCGCCATCCTGGGCGGTGGAACCGACGAGGAGATTGAGAAATTGAGGAAGTTCGCGCGGTATATAGGATTGCTGTTTCAGGTGGTTGATGACATTCTGGATGTTACGAAGTCTTCCCAGGAATTGGGGAAAACTGCGGGGAAGGATCTTACCGCTGATAAGGTTACTTATCCCAAGCTTTTGGGGATTGAGAAGTCTATGGAGTTTGCTGCCAAATTGAACAAAGATGCTCAGGATCAGCTCTCTGGCTTTGACCCTGTCAAGGCTGCTCCTTTAGTTGCTTTATCAAATTACATTGCTCATAGGCAGAACTAG 1095 0.5854 MSALNFNPWLQPSFTRSRSLTFLFHGLTNFPIPILIPKRPRDKPYSSATSFTLSALLTKQETVQTEEKPAFDFNSYMLHQAHAVNQALHDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGSAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIACATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDNVGLERLEFIHIHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLTADKVTYPKLLGIEKSMEFAAKLNKDAQDQLSGFDPVKAAPLVALSNYIAHRQN* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2589 364 SFLD Isoprenoid Synthase Type I 76 362 - -
Pvu3g2589 364 CDD Trans_IPPS_HT 96 362 IPR000092 GO:0008299
Pvu3g2589 364 Pfam Polyprenyl synthetase 100 330 IPR000092 GO:0008299
Pvu3g2589 364 SUPERFAMILY Terpenoid synthases 74 344 IPR008949 -
Pvu3g2589 364 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC-LIKE 1 364 - -
Pvu3g2589 364 Gene3D Farnesyl Diphosphate Synthase 65 364 IPR008949 -
Pvu3g2589 364 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 1 364 - -
Pvu3g2589 364 ProSitePatterns Polyprenyl synthases signature 1. 149 165 IPR033749 -
Pvu3g2589 364 ProSitePatterns Polyprenyl synthases signature 2. 282 294 IPR033749 -
Pvu3g2589 364 SFLD Polyprenyl Transferase Like 76 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2589 Pvu-Chr3 47910673 47912527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2589 K13789 - gmx:100785539 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2589 3 47910673 47912527 Pvu3g2589 3 47910673 47912527 ECH
Pvu3g2589 3 47910673 47912527 Pvu2g0269 2 2813609 2814682 ECH
Pvu2g0269 2 2813609 2814682 Pvu3g2589 3 47910673 47912527 PCT