Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0269 ATGCTCATCACACCTTCACCTCTCTTTCACACTCCCCTTTTCCACACTCTCTCACTGCTTCCCAATACCATCAAACCACCAACGCCAAAACTATCCTCTTCTTCTTCTTTTCACTCTCTCTCAGTCTCTGCTGTGCCCACTAAGGTAGACACCAGTACTGTGAGAATCGCGGAAATCGAAGATCAAACCTTCGATTTCAAAGTCTACATGCTCCACAAGGCCCACACAGTCAACAAAGCCTTGGACGCAGCCATTGCGCTGCGCGACCCGGAGAAGATCCACAAAGCCATGCGATACTCCCTCCTCGCCGGCGGCAAGAGGGTCCGCCCTATTCTCTGCATCGCCGCCTGCGAGCTCGTCGGCGGCGACGAGGCCACCGCCATCCCCTCCGCCTGCGCGGTCGAGATGATCCATACCATGTCGCTCATCCACGACGATCTGCCCTGCATGGACAACGACGACCTCCGCCGCGGCAAGCCCACCAACCACAAGGTCTTCGGCGAGGATGTGGCGGTCCTTGCTGGCGACGCGCTGCTTGCGTTCTCGTTCGAGCATGTGGCGATGGCGACCGAGGGCGTGTCCCCGACGCGCGTGGTTCGCGCGATTGGGGAGCTGGCGAAATCGATCGGTGGGGAAGGCCTTGTGGCGGGACAGGTGGTGGATATAGATTCGGAGGGGGTCTCGAATGTGGGGTTGGAGAGGTTGGAATTCATTCATGTGCACAAAACGGCGAAGTTGCTGGAAGCTGCGGTTGTGTTGGGCGCAATAATGGGAGGTGGGTCGGACGAGGAGGTTGAGAAATTAAGGAAGTTCGCCAGGAGCATCGGATTGCTGTTTCAGGTGGTTGATGACATTCTGGATGTAACTAAGACGTCCGAGGAATTGGGGAAGACGGCGGGGAAGGACTTGGTCGCTGATAAGGTCACGTACCCTAAACTTTTAGGGATAGATAACTCTAAGGAGTTTGCTGAAAAACTGCTGCAGGAAGCCAAGGAACAATTGTTTGGGTTTGATCCCCGAAAGGCAGCGCCGCTACTTGCTTTAACCGATTACATCGCTTACAGGCAAAGTTAA 1074 0.554 MLITPSPLFHTPLFHTLSLLPNTIKPPTPKLSSSSSFHSLSVSAVPTKVDTSTVRIAEIEDQTFDFKVYMLHKAHTVNKALDAAIALRDPEKIHKAMRYSLLAGGKRVRPILCIAACELVGGDEATAIPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFSFEHVAMATEGVSPTRVVRAIGELAKSIGGEGLVAGQVVDIDSEGVSNVGLERLEFIHVHKTAKLLEAAVVLGAIMGGGSDEEVEKLRKFARSIGLLFQVVDDILDVTKTSEELGKTAGKDLVADKVTYPKLLGIDNSKEFAEKLLQEAKEQLFGFDPRKAAPLLALTDYIAYRQS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0269 357 Gene3D Farnesyl Diphosphate Synthase 58 357 IPR008949 -
Pvu2g0269 357 Coils Coil 313 333 - -
Pvu2g0269 357 Pfam Polyprenyl synthetase 91 329 IPR000092 GO:0008299
Pvu2g0269 357 SFLD Polyprenyl Transferase Like 71 355 - -
Pvu2g0269 357 CDD Trans_IPPS_HT 89 355 IPR000092 GO:0008299
Pvu2g0269 357 SFLD Isoprenoid Synthase Type I 71 355 - -
Pvu2g0269 357 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 31 356 - -
Pvu2g0269 357 SUPERFAMILY Terpenoid synthases 69 335 IPR008949 -
Pvu2g0269 357 ProSitePatterns Polyprenyl synthases signature 1. 142 158 IPR033749 -
Pvu2g0269 357 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC 31 356 - -
Pvu2g0269 357 ProSitePatterns Polyprenyl synthases signature 2. 275 287 IPR033749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0269 Pvu-Chr2 2813609 2814682 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0269 K13789 - gmx:100778289 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0269 2 2813609 2814682 Pvu2g0269 2 2813609 2814682 ECH
Pvu3g2589 3 47910673 47912527 Pvu2g0269 2 2813609 2814682 ECH
Pvu2g0269 2 2813609 2814682 Pvu3g2589 3 47910673 47912527 PCT