Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2585 ATGGCAGGTTCTTACTGTGTTGAAGAGAGAAAAGCATGTGTGAGATGGGTGGAGAAATATTTCAAAGATTGCCTCTGCAATATGAAAGATGAAATCTCGTTCAGTCTGGGTCTCATAAGTCTAGTATTCTGGGGAGTTGCTGAAATTCCTCAAATAATAACCATTTTTCGAACTAAGAAAAGTCATGGAGTATCCCTCCTTTTTCTCCTCACTTGGGTCGCTGGGGATATCTGCAATTTGACTGGTTGCCTTCTTGAACCAGCTACTTTGCCAACACAGTATTACACAGCTCTGCTTTACACAATCACTACGATCGTGTTACTACTGCTAATCATATATTACGACTACATAAGCAATTGGTACAAACTTCGTCAGAAGGTCAACCACAAAAGGGATGAAGAAGAAGAGAGAAAACAATTGAAGCCACCGAAACCAACCTACGAGTCAGGAATTCCAATACCAAATGGCACACTCAAAGCAGTACCTAGACAGGAGTACTTTTATATGTCAGCAAGATCATTGGCTGGAAGTGGCACTCCACCCTGGGGAACTTACATGAGAGCTGCTAAAAGTGGTCCTTCCGCCATGGAATCCATACATGACTCTTCTTCCGAGGATGATGAAACTTATCCAGCTTTCTCAAAAAATCCTCCAACCAAAGCTAGGCCAATCCCACGTCCTGCAGTTGGAAGTTATGGTACATTTCTAGCAGCTGCTGTTAATTTGCCTCTCAAGGCTAATGCTTTGAGGGAAGGATACATAAGATTTGGTGGAAGAAAACTTTTGCAGGAATACGAGACACATAGTACATTTGGTCAAGGATTGGGATGGCTCATGGCTGCTATCTATATAAGTGGTCGGATTCCTCAAATATGGTTGAACATTAAAAGAGGCAGTGTGGAGGGCTTAAGTCCTTTCATGTTCATCTTTGCATTGGTCGCTAATGTCACTTACGTGGGAAGTATTCTTGTGAGAACTACAGAATTCGAAAGCATCAAAGCTAATATGCCATGGTTATTGGATGCAGTATTATGCGTGGCATTGGACCTTTTCATAATATTGCAGTACATCTACTATAGATACTTGCCGAGGAGAGAAGAAAGAGGAGACTACTACGAAGGGGAAAGAGCTGCATCATCTTGA 1143 0.4199 MAGSYCVEERKACVRWVEKYFKDCLCNMKDEISFSLGLISLVFWGVAEIPQIITIFRTKKSHGVSLLFLLTWVAGDICNLTGCLLEPATLPTQYYTALLYTITTIVLLLLIIYYDYISNWYKLRQKVNHKRDEEEERKQLKPPKPTYESGIPIPNGTLKAVPRQEYFYMSARSLAGSGTPPWGTYMRAAKSGPSAMESIHDSSSEDDETYPAFSKNPPTKARPIPRPAVGSYGTFLAAAVNLPLKANALREGYIRFGGRKLLQEYETHSTFGQGLGWLMAAIYISGRIPQIWLNIKRGSVEGLSPFMFIFALVANVTYVGSILVRTTEFESIKANMPWLLDAVLCVALDLFIILQYIYYRYLPRREERGDYYEGERAASS* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2585 380 MobiDBLite consensus disorder prediction 131 153 - -
Pvu3g2585 380 Pfam PQ loop repeat 272 327 IPR006603 -
Pvu3g2585 380 Pfam PQ loop repeat 32 88 IPR006603 -
Pvu3g2585 380 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 1 378 - -
Pvu3g2585 380 MobiDBLite consensus disorder prediction 195 224 - -
Pvu3g2585 380 PANTHER PQ-LOOP PROTEIN/TRANSMEMBRANE FAMILY PROTEIN 1 378 - -
Pvu3g2585 380 Gene3D - 273 369 - -
Pvu3g2585 380 Gene3D - 28 116 - -
Pvu3g2585 380 SMART ctns 46 77 IPR006603 -
Pvu3g2585 380 SMART ctns 285 316 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2585 Pvu-Chr3 47835403 47839583 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2585 K23678 - gmx:100787660 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2585 3 47835403 47839583 Pvu3g2585 3 47835403 47839583 ECH
Pvu2g0264 2 2777078 2780641 Pvu3g2585 3 47835403 47839583 PCT