Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0264 ATGCCTCCCTCGTACTGCGTGAAGGAGACTAAACCCTGCGTGGGTTGGGTTCAGCATTACTTCCAGGATTGTCTCTGCGATCTTAAAGATGAAATCTCCTTTGCCTTGGGCTTCACTAGTCTCATATGCTGGGGAGTAGCAGAAATTCCTCAGATTATCACCAACTTTCGCGCTAAGTCTAGCCATGGTGTCTCTCTAGCCTTTCTCCTCACTTGGGTCGCTGGCGACATATTCAATCTCGTTGGCTGTGTTATGGAGCCTGCCACGTTGCCTACTCAGTACTACACAGCTCTGCTTTACACAATCACTACGATCGTGCTAGTTCTTCAAACTCTCTATTATGACTATATCTATAAATGGGGCAAGCATCATCGAAAGACCAACATGGACGAGGCCCAGGAAGAAGAGAAAAAACCCTTGAGACCCAAACCAGGGCCTCAATCTGGGATTGCAATACCAAATGACGAACCCAAAGCAACGCCTCGACGGGAATACTACTACAGGTCAGCCAGATCTCTGGCTGCTAATACTCCACCATTTGGTACCTACTTGAGAGCTGCTAAAAGTGTCCCTTCAGCCATGGAAATGAACAATGATTCATCCTCTGATGATGAGCCACCTCAACTTTCTTCCACCAAGCCTGTGACACAGCCTAGACCCATCCCTCGATCTGTCCCTGCAAGCTATGGAACATTTCTAGCAGCATCTATGAACTTGCTCCGGCAGGGTAATGCTTTGAAGGAGGGATACATCAGATTCAATGGAAGAAAGCTACTGGTGCAGGAGCAAAACATGCACAGTGCCTTGGGTCAGTGGTTAGGATGGTTCATGGCTGTTATCTATATGGGTGGCAGGCTCCCTCAAATATGGTTGAATATTAAACGAGGGAGTGTGGAGGGCTTAAATCCTCTGATGTTCCTCTTTGCATTGATCGCGAATGCCACTTACGTTGGAAGTATTCTTGTAAGAACTACTGAATGGGAAAGCATCAGAGCAAATATGCCATGGTTGTTGGATGCCGTAGGTTGTGTCGCATTGGACCTATTTATAATTTTGCAGTACGCCAACTATAGATACATTCGGAAGAAAGCAAGAAGTGATGATGGTGATTACGGGAACTACAAGGAAGCCAGCAAAACTTTTGTGTCTTGA 1152 0.4635 MPPSYCVKETKPCVGWVQHYFQDCLCDLKDEISFALGFTSLICWGVAEIPQIITNFRAKSSHGVSLAFLLTWVAGDIFNLVGCVMEPATLPTQYYTALLYTITTIVLVLQTLYYDYIYKWGKHHRKTNMDEAQEEEKKPLRPKPGPQSGIAIPNDEPKATPRREYYYRSARSLAANTPPFGTYLRAAKSVPSAMEMNNDSSSDDEPPQLSSTKPVTQPRPIPRSVPASYGTFLAASMNLLRQGNALKEGYIRFNGRKLLVQEQNMHSALGQWLGWFMAVIYMGGRLPQIWLNIKRGSVEGLNPLMFLFALIANATYVGSILVRTTEWESIRANMPWLLDAVGCVALDLFIILQYANYRYIRKKARSDDGDYGNYKEASKTFVS* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0264 383 Gene3D - 33 132 - -
Pvu2g0264 383 Gene3D - 270 371 - -
Pvu2g0264 383 SMART ctns 283 314 IPR006603 -
Pvu2g0264 383 SMART ctns 46 77 IPR006603 -
Pvu2g0264 383 MobiDBLite consensus disorder prediction 192 222 - -
Pvu2g0264 383 Pfam PQ loop repeat 269 327 IPR006603 -
Pvu2g0264 383 Pfam PQ loop repeat 32 88 IPR006603 -
Pvu2g0264 383 MobiDBLite consensus disorder prediction 129 158 - -
Pvu2g0264 383 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 1 370 - -
Pvu2g0264 383 MobiDBLite consensus disorder prediction 193 218 - -
Pvu2g0264 383 PANTHER PQ-LOOP PROTEIN/TRANSMEMBRANE FAMILY PROTEIN 1 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0264 Pvu-Chr2 2777078 2780641 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0264 K23678 - gmx:100815310 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0264 2 2777078 2780641 Pvu2g0264 2 2777078 2780641 ECH
Pvu2g0264 2 2777078 2780641 Pvu3g2585 3 47835403 47839583 PCT