Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2501 ATGTGGAAACCCTACGTCAACATGAAGAATCAAAGCCAAGTGATAATGCTAGTTCTTCTGGCACTTTCCCTGGTTAATGGCTTCTCCTGCCTCAAGCTAGGAGAAACTTGTGGGTCTGATAACAAATGTGAGGATGGTCTTAAATGTGCAACATGTCCTGAAAATGGGAATACCCGCTCTAGATGCATCAGGACCCAACCTATAATCCCTACTTCCAAGGTGAAAGGTTTGGCGTTCAACAAATATTCATGGCTGACAACTCATAACTCATTTGCTCAATCTGGCATTAGATCGGACACGGGATCAATCGTTGTAACCACCACAAATCAGGAAGACACAATTGCCCAACAACTCCATAATGGAGTTCGTGGCCTTATGTTAGATATGTATGAATTTAAAGATGACATATGGTTGTGTCACTCCTTCGGAGGCAAATGTTACGATGCCACTTCGTTTAAACCAGCTATAAGCGCGCTTAAAGACGTTCATGCATTTCTGGAAGCAAATCCATCAGAAATTGTGACCATCTTCATTGAAGACTATGTGGCAGCTCCCCAGGGGATTTCAAAGGTGTTTAATGATGCAGGGTTGAACAATTACTTGTTTCCATTGTCTAAAATGCCCAAAAATGGTGAAGATTGGCCAACTGTGGATGACATGGTTAAGCAGAATCAACGCTTAGTTGTTTTCACCTCTAAATCATCTAAAGAAGCTTCTGAGGGAATTGCTCATGAGTGGACTTATGTTGTAGAAAACCAATATGGAGACGAGGGAATGAAAGATGGTTCTTGTCCAAATCGTGGAGAATCTCCAGCAATGAACACCAAATCAAAGTCATTGGTTCTGATGAACTATTTTCTCACTAATGCTAATGCAACTGCGGTTTGTGCTCAAAATTCGGCTCCATTAGTTAACATGTTGAAAACTTGTCATGTTGCTGCAGATAACCGGTGGCCGAATTTCATTGCCATTGATTTTTATCTGAGGAGTGATGGAGGAGGAGCCCCTGAAGCTGTTGACATAGCCAATGGTCACTTAACTTGCGGATGTGACAACATTGCCTATTGCAAGGATAATGCCCCATATGGAACATGTGATGTTCCTCCAATTTCTCCGCCGCCACCTGCGGCTGCTCCCCCAGTCGCTGTTGTGACCAAAGAAGCAGAGCCACCGATGAAGGAAGAATTTCATGTGGACACCCCTCTCAAGTTGCTGCAATTTTTATGGAAATGGTTGCTAAGTCTGGCTTCTCATGACCAAAATTGA 1266 0.4305 MWKPYVNMKNQSQVIMLVLLALSLVNGFSCLKLGETCGSDNKCEDGLKCATCPENGNTRSRCIRTQPIIPTSKVKGLAFNKYSWLTTHNSFAQSGIRSDTGSIVVTTTNQEDTIAQQLHNGVRGLMLDMYEFKDDIWLCHSFGGKCYDATSFKPAISALKDVHAFLEANPSEIVTIFIEDYVAAPQGISKVFNDAGLNNYLFPLSKMPKNGEDWPTVDDMVKQNQRLVVFTSKSSKEASEGIAHEWTYVVENQYGDEGMKDGSCPNRGESPAMNTKSKSLVLMNYFLTNANATAVCAQNSAPLVNMLKTCHVAADNRWPNFIAIDFYLRSDGGGAPEAVDIANGHLTCGCDNIAYCKDNAPYGTCDVPPISPPPPAAAPPVAVVTKEAEPPMKEEFHVDTPLKLLQFLWKWLLSLASHDQN* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2501 421 Gene3D Phosphatidylinositol (PI) phosphodiesterase 70 333 IPR017946 GO:0006629|GO:0008081
Pvu3g2501 421 PANTHER UNCHARACTERIZED 9 386 - -
Pvu3g2501 421 CDD PI-PLCc_At5g67130_like 70 343 - -
Pvu3g2501 421 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 79 186 - -
Pvu3g2501 421 SUPERFAMILY PLC-like phosphodiesterases 76 344 IPR017946 GO:0006629|GO:0008081
Pvu3g2501 421 PANTHER PLC-LIKE PHOSPHODIESTERASES SUPERFAMILY PROTEIN 9 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2501 Pvu-Chr3 46714064 46720997 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2501 - - gmx:100809640 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0488 11 4114903 4118496 Pvu3g2501 3 46714064 46720997 ECH
Pvu3g2501 3 46714064 46720997 Pvu3g2501 3 46714064 46720997 ECH