Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0488 ATGGCTGTTCTTATACCTGCAAGTTCATGTTTTGGAGCAAAGTATCAGACTCTAGCACCATTGAGAATTTTAAGGGGTCTGGTGTGTCTACTGGTTCTGCTTTCAACAGCATTTATAATGTTAGTGTTCTTTGGCTTTATAAGTTCTGTTGTAGTTCGACTTTTTAGTGTCCGTTACAGCAGGAGAGCAACTTCCTTTTTCTTTGGTGCCTGGCTTGCCTTGTGGCCCTTTCTATTTGAAAAGATCAACAAGACTAAAGTTGTATTTTCTGGAGATGATGTTCCTTCAAGAGAACGGATCTTACTGATCGCAAATCATAGAACTGAGGTTGATTGGATGTATTTATGGGACCTTGCCTTGAGGAAGGGATGCATTGGATATATAAAATATATACTTAAAAGCAGCTTGATGAGACTTCCAGTTTTTGGTTGGTCATTTCACATACTGGAGTTCATCCCAGTGGAAAGAAAGTGGGAGGCAGATGAGTCAATCATGCGCCATATGCTTTCAACATTCAAGGATCCCCAAGATCCTCTCTGGCTTGCTCTTTTCCCAGAAGGCACTGATTTTACTGACCAAAAGTGCCTTCGGAGTCAAAAGTATGCTGCTGAACACGGGTTACCAGTTCTGAAAAATGTCTTACTTCCAAAGACAAAGGGCTTCTGCGCCTGCTTGCAAGAGTTGAGGGAATCTCTCACTGCAGTTTATGACATGACCATTGGCTACAAATACCGCTGCCCATCTTTCTTGGACAATGTCTTTGGGGTGGATCCTTCTGAAGTTCATATTCATATTCGCCGCATCCCCCTCGATAGTATCCCGGTATCTGAGAGTGAAATGTCCACTTGGTTGATAGATAGATTCCAGTTGAAGGATCAGTTACTTTCCAAATTTCAAATTCAAGGCCAGTTTCCGGATCCAGCAACAGAAAGGGACCTCTCTACTGTGAAGAGCATTTTGAATTGTATGACAATTGTTACCGTGACAGGCACATGCATGTACTACAGTTTTTCCTCTGTCTGGTTTAGACTTTATGTGTCTCTAGTCTGTGCTTATTTGGTTCCAGCCACGTATTACAATATTCGGCCACAGCCCATTCTTAGCCTTTTGAAGAAGAGATCAAATTGA 1128 0.4202 MAVLIPASSCFGAKYQTLAPLRILRGLVCLLVLLSTAFIMLVFFGFISSVVVRLFSVRYSRRATSFFFGAWLALWPFLFEKINKTKVVFSGDDVPSRERILLIANHRTEVDWMYLWDLALRKGCIGYIKYILKSSLMRLPVFGWSFHILEFIPVERKWEADESIMRHMLSTFKDPQDPLWLALFPEGTDFTDQKCLRSQKYAAEHGLPVLKNVLLPKTKGFCACLQELRESLTAVYDMTIGYKYRCPSFLDNVFGVDPSEVHIHIRRIPLDSIPVSESEMSTWLIDRFQLKDQLLSKFQIQGQFPDPATERDLSTVKSILNCMTIVTVTGTCMYYSFSSVWFRLYVSLVCAYLVPATYYNIRPQPILSLLKKRSN* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0488 375 CDD LPLAT_LCLAT1-like 76 266 - -
Pvu11g0488 375 SMART plsc_2 100 214 IPR002123 GO:0016746
Pvu11g0488 375 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 29 213 - -
Pvu11g0488 375 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5-RELATED 1 372 - -
Pvu11g0488 375 Pfam Acyltransferase 89 243 IPR002123 GO:0016746
Pvu11g0488 375 Pfam Acyltransferase C-terminus 254 322 IPR032098 -
Pvu11g0488 375 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0488 Pvu-Chr11 4114903 4118496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0488 14 365 Miscellaneous Gene Families AT1G75020 61.756 3.81e-164 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0488 K13513 - gmx:100814885 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0488 11 4114903 4118496 Pvu11g0488 11 4114903 4118496 ECH
Pvu11g0488 11 4114903 4118496 Pvu3g2501 3 46714064 46720997 ECH