Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2483 ATGAAGAACACAAACACCAACACCAAATTCATCCTTCTCCACCCTTATATCCAAAAACAAGGAAGCTCCAATCGCCTATGGCTCCTAGCCTTTATATCAATCCTCACCCTCGCTTTCCTCGTCACCCTCATTTACACAAGAGAATCCACTTTCATCACCACCGCAACTTCTTCGGTCATTGCTTCTTCCAATGCCCCAGTTTCTGGTCTCGGAATTGCTCCTTTGCCTCCCACAGTCATCAACACTCTCCTCCACTACGCCTCAAAATCCAACGATACCAACCACATGCCACACTCAGACCTCAAACCCATCTCCGACGTGCTCCGAAAGTGCTCATCCCCATGCAACTTACTCATCTTCGGTCTCACATCCGAAACCCTTCTCTGGAAAGCCCTCAACCACTACGGCAGAACCGTGTTTATCGACGAAAACCGTTATTACGCTGCATATTACGAAGAACTGCACCCAGAAATCGACGCCTACGACGTGCAATACACCACCAAGAGAAGCGAGATGAAGGAGCTCATAACCTCTGTTAAAGAACGGGTAGCCAACGAGTGCAAGCCAGTGCAGAATCTTTTGTTTTCAGACTGCAAACTGGGTCTCAACGACCTTCCCAACCACGTGTACGACGTTGACTGGGATGTCATATTGGTGGACGGGCCACGTGGCGACTGGCCCGACGCCCCTGGAAGGATGTCGGCAATCTTCACCGCCGGAGTTCTGGCGAGGAGCAAAAAAGGTGGGAACCCTAAGACCCATGTGTTTGTGCATGACTTCTCTGGGGAGGTGGAAAAGGTCTGTGGGAGTGAGTTCCTGTGCAGTGAGAATTTGGTGGAGGCAAGTGAGAGTTTGGGGCATTATGTGGTGGAAAGAATGGATGAGAGTAGTGTTCAGTATTGTAAGACTCACTCTTCTTCTGGCTCAGGGAATGCTTCAACAACGTAA 948 0.4979 MKNTNTNTKFILLHPYIQKQGSSNRLWLLAFISILTLAFLVTLIYTRESTFITTATSSVIASSNAPVSGLGIAPLPPTVINTLLHYASKSNDTNHMPHSDLKPISDVLRKCSSPCNLLIFGLTSETLLWKALNHYGRTVFIDENRYYAAYYEELHPEIDAYDVQYTTKRSEMKELITSVKERVANECKPVQNLLFSDCKLGLNDLPNHVYDVDWDVILVDGPRGDWPDAPGRMSAIFTAGVLARSKKGGNPKTHVFVHDFSGEVEKVCGSEFLCSENLVEASESLGHYVVERMDESSVQYCKTHSSSGSGNASTT* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2483 315 Pfam Polysaccharide biosynthesis 101 287 IPR021148 -
Pvu3g2483 315 PANTHER PROTEIN IRREGULAR XYLEM 15 1 306 - -
Pvu3g2483 315 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 75 301 IPR006514 GO:0045492
Pvu3g2483 315 PANTHER OS11G0490100 PROTEIN 1 306 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2483 Pvu-Chr3 46433193 46434140 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2483 - - gmx:100784765 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0164 2 1783762 1785046 Pvu3g2483 3 46433193 46434140 ECH
Pvu3g2483 3 46433193 46434140 Pvu3g2483 3 46433193 46434140 ECH
Pvu2g0164 2 1783762 1785046 Pvu3g2483 3 46433193 46434140 PCT