Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0164 ATGGTCATTGTAGGGTCACTCTCAATGATATTTTCCCTTCACACTCTCCCTTATTCTAATTTAAATCAAACCTTCTCCCCCAGAGCTCAGAATCTGCAGCTCTACCACACCAAAGCAACACATATTTTTCATTCAAAACCTCTTCACCCCTCCAACATGAAGAACACTACCAGCAACACAAAGTTCATCCTCCTCCACCCATATATCCAGAAACAAGGAAGCTCCAACCGCCTATGGCTTCTAGCTTTCATATCTTTCTTCACCCTGGCCTTCCTTGCCACGCTCATTTACACCAGAGACACAACCTCATCCACCACTGCCACCACCTCTTTCGCCCCTTTATCTACTTTCACCAACACCCCGTTGCCTTCCTCCGTCATCAACACCCTCCTCCACTACGCCTCAAAATCCAATGACACGTACCACATGTCCCACTCGGATCTCAAAACCATCTCTGACGTGCTCCGAAAGTGCCCATCACCATGCAACTTCCTCGTCTTCGGCCTCACCCCAGAGACCCTCCTCTGGAAAGCCCTCAACCACAACGGAAGAACGGTTTTCATCGACGAAAACCGGTACTACGCCGCATACTTCGAAGAAAAGCACCCCGAAATCGATGCCTACGACGTGCAATACACGACCAAAAGGAGCGAGATGAAGGAGCTGATAGCTTCGGCCAAAGAACAGGCGGGAAACGAGTGCAGGCCAGTGCAGAATCTTCTGTTTTCGGAGTGCAAGTTAGGACTGAACGATCTTCCCAACCACGTCTATGAAGTGGATTGGGATGTGATATTGGTGGACGGTCCAAGAGGTGACTGGCCGGACGCTCCCGGCAGAATGTCGCCTATCTTCACCGCCGGCGTGCTTGCCCGGAGCAAGAAGAGTGGGAACCCGAAGACGCATGTGTTTGTGCATGACTTCTCAGGGAAAGTGGAAAGGGTTTGTGGGAACGAGTTTCTGTGCAAGGAAAATTTGGTGGAGACAACGCACTCTTTGGGACACTATATGCTGGAAAAAATGGACGAAAGTAGCGTCAAGTATTGTAAGAATCATAACCACTCATCAGGCTCTGCTTCTTCGTCTTAG 1086 0.4972 MVIVGSLSMIFSLHTLPYSNLNQTFSPRAQNLQLYHTKATHIFHSKPLHPSNMKNTTSNTKFILLHPYIQKQGSSNRLWLLAFISFFTLAFLATLIYTRDTTSSTTATTSFAPLSTFTNTPLPSSVINTLLHYASKSNDTYHMSHSDLKTISDVLRKCPSPCNFLVFGLTPETLLWKALNHNGRTVFIDENRYYAAYFEEKHPEIDAYDVQYTTKRSEMKELIASAKEQAGNECRPVQNLLFSECKLGLNDLPNHVYEVDWDVILVDGPRGDWPDAPGRMSPIFTAGVLARSKKSGNPKTHVFVHDFSGKVERVCGNEFLCKENLVETTHSLGHYMLEKMDESSVKYCKNHNHSSGSASSS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0164 361 Pfam Polysaccharide biosynthesis 147 334 IPR021148 -
Pvu2g0164 361 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 121 348 IPR006514 GO:0045492
Pvu2g0164 361 PANTHER PROTEIN IRREGULAR XYLEM 15 53 353 - -
Pvu2g0164 361 PANTHER OS11G0490100 PROTEIN 53 353 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0164 Pvu-Chr2 1783762 1785046 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0164 - - pvu:PHAVU_002G016200g 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0164 2 1783762 1785046 Pvu3g2483 3 46433193 46434140 ECH
Pvu2g0164 2 1783762 1785046 Pvu2g0164 2 1783762 1785046 ECH
Pvu2g0164 2 1783762 1785046 Pvu3g2483 3 46433193 46434140 PCT