Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2477 ATGGACGTCGCCGGAGGATCAATTAGAGCCGCCATATCACGGTGGGAGTTGGCGGTGTGGCGGCAGTACCAGCACGTGCTGGACAAGTGGACGCCGCTTGTGGGACGGCGGTGGGTGGGGTTGCTGGTGGTGGCGCTGATGTACGCGCTGCGCGTCTACTTGGTGGAAGGGTTCTACTTAGTGTCGTACGGTTTGGGAATATACATCCTCAACCTTCTGATCGGGTTCCTCTCCCCTCAGGTGGACCCCGAGATTCTCGACGGTGAGGGCCCCACACTCCCCTCCTCCGTAAACGACGAGTTTCGTCCCTTCGTTCGCCGCCTCCCCGAATTCAAGTTCTGGTACTCAATCACAAAGGCGTTTTGCGTCGCATTTGTGATGACTTTCTTCAGTGCGTTTGATGTTCCAGTGTTCTGGCCAATACTCCTCTTCTACTGGGTGGTCCTATTCACGCTTACAATGAGGAGACAGATATCTCACATGATTAAGTACAAATATTTACCCTTCTCATCTGGAAAACAGCGTTATGATGGAAAGAGAGCATCACCTGAAAGCACAAGCCTTTCAGATGGCTGA 576 0.5312 MDVAGGSIRAAISRWELAVWRQYQHVLDKWTPLVGRRWVGLLVVALMYALRVYLVEGFYLVSYGLGIYILNLLIGFLSPQVDPEILDGEGPTLPSSVNDEFRPFVRRLPEFKFWYSITKAFCVAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYLPFSSGKQRYDGKRASPESTSLSDG* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2477 191 PIRSF AtER_Rer1p 2 187 IPR004932 GO:0016021
Pvu3g2477 191 Pfam Rer1 family 18 176 IPR004932 GO:0016021
Pvu3g2477 191 PANTHER PROTEIN RER1C 8 186 - -
Pvu3g2477 191 PANTHER PROTEIN RER1 8 186 IPR004932 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2477 Pvu-Chr3 46386010 46388573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2477 1 182 Miscellaneous Gene Families AT4G39220 65.591 1.78e-88 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2477 - - gmx:100804538 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2477 3 46386010 46388573 Pvu3g2477 3 46386010 46388573 ECH
Pvu9g0240 9 5312322 5314835 Pvu3g2477 3 46386010 46388573 ECH
Pvu2g0160 2 1748429 1750603 Pvu3g2477 3 46386010 46388573 PCT