Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0160 ATGGACGTAGGAGTCGCCGACGATCATTCCCCGGAAGCCGCCATATCGCGGTGGAAATTCGCGGTGTCGCGGCAGTATCAGCACATGCTGGACAAAACGACGCCGCACGTCTTCCGCCGCTGGATCGGGTGTCTGGTGGTGGCTGCCGTCTACGTCCTCCGCGTGTACTTGGTCCAAGGCTTCTACATCGTCTCCTACGCCCTCGGCATTTACATCCTCAACCTCCTCATCGGCTTCCTCTCCCCTCAGGTCGATCCCGAGATTCACGACGGCCCCACCCTCCCCACCCGAGGATCTGATGAGTTCCGCCCCTTCGTCCGCCGCCTCCCTGAGTTCAAGTTCTGGTACTCGATCACAAAGGCGTTTTGCATTGCATTTGTGATGACTTTCTTTAGTGCCTTTGATGTTCCAGTATTCTGGCCGATACTCCTTTTTTACTGGGTGGTCCTATTCACACTTACAATGAGGAGACAGATATCACACATGATAAAATATAAATATGTTCCATTCTCGTTCGGGAAACAGCGCTATGGAAAGAGAACACCAGCAGAAAGCACCAGCCCGACCGTGGACTGA 576 0.5399 MDVGVADDHSPEAAISRWKFAVSRQYQHMLDKTTPHVFRRWIGCLVVAAVYVLRVYLVQGFYIVSYALGIYILNLLIGFLSPQVDPEIHDGPTLPTRGSDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYGKRTPAESTSPTVD* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0160 191 Pfam Rer1 family 20 178 IPR004932 GO:0016021
Pvu2g0160 191 PIRSF AtER_Rer1p 1 188 IPR004932 GO:0016021
Pvu2g0160 191 PANTHER PROTEIN RER1 7 185 IPR004932 GO:0016021
Pvu2g0160 191 PANTHER PROTEIN RER1C 7 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0160 Pvu-Chr2 1748429 1750603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0160 1 187 Miscellaneous Gene Families AT4G39220 68.947 1.35e-95 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0160 - - gmx:100805147 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0160 2 1748429 1750603 Pvu2g0160 2 1748429 1750603 ECH
Pvu2g0160 2 1748429 1750603 Pvu3g2477 3 46386010 46388573 PCT