Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2354 ATGAAAACAAGGAGAGGAAGACGCTCAGAGGCCTTTTGGCCCTCCCTTGTGATGAAGAAATGGTTAAACATAAAGCCAAAGGTGTATGATTTTAGTGAGGATGAAGTGGACACTGAAACTGAGAGTGAAGATGATGTTTGCTCTCTTAAAGACTCAAGAATGGGTGTGCGTGAAGATAATCCACTTAGAACATCATCCATATTCCCAAGTCAAACATCAGATGCATCTTGTAAGGGCTATAAGGTCAGGCATAGAAGAGGGAAATCAGAAACTCTGCGTGTTCAATACATAAATACAAAGGAAGTGAGGGTAACAATTGGCACCTGGAATGTTGCTGGAAGAATTCCATGTAAGGATCTTGAAATTGAGGACTGGCTTTGCACCGATGAGCCAGCAGATATTTACATTATTGGTTTCCAAGAGGTAGTCCCCTTGAATGCTGGAAATGTTCTTGGGGCAGAGGATAATACACCCATCCGAAATTGGGAAGCAATCATTAGAAGAACTCTAAACAAATCTTCTGAACCTGAAAGCAAGCCGAAAAGCTACAGTGCCCCTTCTTCTCCTGTCCTGAGAGCTTCTGCAAATGTTCTAGCAGACAGTATAGATGTTAATCCACTAGACACAATGAATGAGGAGTACTTGGGAAGTTTTAACAATGTTGAGCTAGAACAAGAGGAAGTCAAAAGCTTAATTGGTAGAGGAAGGACTTTGCAGTTGAGGAATATAAATGACATTGATCCTCAGACCATACTTGATTGGCCTGAACGTCCTTTAGATGCAATCCCACATACTGATTCCAGTTCAAAATTGCGCAGAGTATTTAGCTCAGACAGAATTGGCTTTAACCTAACAGACAACAAGGGTTCAAAATATGGGAGTGTAATGAAACGGACACACCATAGTTCGGGAAATTTGGGCTTGTTATGGAAAGAACAGCAAGTGATGCCTGAGGAAGTAATTGATACCCTTGATGAGTTATCTGGCATGTTATCTGATGAGGAAGATGATGATTTTCTTGAATTGCCAAATGACAACGATGATGATGGAATAGGGGCCGTGAAATCACATCGTAAGTATGTCCGGATCGTCAGCAAGCAGATGGTAGGAATATACGTGTCTATTTGGGTGCAAAGGAGGTTGAGAAGGCACATTAACAACTTGAAAGTTTCTCCAGTTGGAGTTGGTCTCATGGGCTACATGGGAAACAAGGGGTCTGTTTCAGTTAGTATGTCTCTCTTTCAGTCACGTTTGTGCTTTGTTTGTTCGCATTTGACTTCTGGTCAGAAGGATGGTGCAGAAATAAGACGAAACTCGGATGTTCATGAAATTCTTCGCCGCACTTGCTTCTCATCTGTCTTTGATACAGATCAGCCACAAACAATCCCATCTCACGATCAAATTTTCTGGTTTGGGGATTTAAACTATCGTATCAATATGATGGATGAGGAGGTTCGAAAGCTGGTAGCTCTAAAGAAATGGAATGAACTAATGAATTACGATCAGTTAACTAATGAATTACGTAGTGGGCACGTGTTTGATGGATGGAAAGAGGGATTAATAAACTTCCCACCCACTTACAAGTATGAATTTAATTCTGACATATATATTGGTGAGAATCCAAAAGAAGGGGAAAAGAAGAGATCTCCAGCCTGGTGTGATCGTATATTGTGGTTTGGGAAAGGAATAAAACAACTTCAATACAACAGAGCAGAAAACAAGCTCTCAGATCATCGAGCAGTTAGCTCAATATTCTGCATTGATGTTGAAGTATTTGACAACCGCAAATTACAACGAGTCCTGAATTTTACAAAGGCGGCAGTACACCCAGAGGTTTTCCTTAGAGAAGATGGAGAGTGGTCATACTAG 1869 0.4098 MKTRRGRRSEAFWPSLVMKKWLNIKPKVYDFSEDEVDTETESEDDVCSLKDSRMGVREDNPLRTSSIFPSQTSDASCKGYKVRHRRGKSETLRVQYINTKEVRVTIGTWNVAGRIPCKDLEIEDWLCTDEPADIYIIGFQEVVPLNAGNVLGAEDNTPIRNWEAIIRRTLNKSSEPESKPKSYSAPSSPVLRASANVLADSIDVNPLDTMNEEYLGSFNNVELEQEEVKSLIGRGRTLQLRNINDIDPQTILDWPERPLDAIPHTDSSSKLRRVFSSDRIGFNLTDNKGSKYGSVMKRTHHSSGNLGLLWKEQQVMPEEVIDTLDELSGMLSDEEDDDFLELPNDNDDDGIGAVKSHRKYVRIVSKQMVGIYVSIWVQRRLRRHINNLKVSPVGVGLMGYMGNKGSVSVSMSLFQSRLCFVCSHLTSGQKDGAEIRRNSDVHEILRRTCFSSVFDTDQPQTIPSHDQIFWFGDLNYRINMMDEEVRKLVALKKWNELMNYDQLTNELRSGHVFDGWKEGLINFPPTYKYEFNSDIYIGENPKEGEKKRSPAWCDRILWFGKGIKQLQYNRAENKLSDHRAVSSIFCIDVEVFDNRKLQRVLNFTKAAVHPEVFLREDGEWSY* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2354 622 SUPERFAMILY DNase I-like 94 604 IPR036691 -
Pvu3g2354 622 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 615 IPR045849 GO:0004445|GO:0046855
Pvu3g2354 622 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 615 - -
Pvu3g2354 622 Gene3D Endonuclease/exonuclease/phosphatase 84 192 IPR036691 -
Pvu3g2354 622 SMART i5p_5 288 593 IPR000300 GO:0016791|GO:0046856
Pvu3g2354 622 Gene3D Endonuclease/exonuclease/phosphatase 323 612 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2354 Pvu-Chr3 44882912 44888182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2354 349 558 Acyl Lipid Metabolism Gene Families AT2G31830 34.454 2.61e-34 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2354 K24221 - gmx:100807214 1052.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0053 2 615741 620868 Pvu3g2354 3 44882912 44888182 PCT