Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0053 ATGAAGGCAAGGAGAGGAAAACGCTCTGAGGCTTTCTGGCCTTCCATTGTGATGAAGAAATGGTTAAACATCAAGCCCAAGGTGAATGACTTTAGTGAAGATGAAGTGGACACTGAAACTGAGAGTGAAGATGATGCTTGCTCTCCTAGAGTCTCAAGAATGCGTGAAGATAAACCCCCCCTTAGAACACAAGGGGTTCCATCCAAATTCTCAAGTCAAAGATCAGATGCATCTTGTAAGGGCCAGAAGGCAAGACACAGAAGAGGAAAATCTGAAACTCTGCGTGCTCAGTACATAAACACAAAGGAAGTGAGGGTAACAATTGGCACATGGAATGTTGCTGGAAGACATCCTTATGAGGATCTTGAAATTGATGACTGGCTTTGCACTGAAGACCCAGCTGATATTTACATTCTTGGTTTTCAGGAGGTAGTTCCACTGAATGCAGGAAATGTGCTAGGAGCAGAAGACAATACACCCATCCAAAAATGGGAGGCAATCATTAGGAGATCTCTAAACAAATCTTCTGAGCCTGACAGTAAACACAAAAGCTACAGTGCCCCTCCTTCTCCAGTGTTAAGAACTTCTTCTGCAGCTGATCTCCTAGCAGACACTATGGACGTTGATAATCCAATTCCAATAGATATGATGATTGAGGAATTTGTAGGAACGGTACACAATAACGAGGTGAAACAGCAGGAAGTGAAGAGCATAATTGATATACAGAATAACTTGCAGTTGAGGAGAATATATGGCATTGATATTGACTGGCCTGAACGCTCATTAGATGCAATCCCTCAAATTGTTGATTCCAATTCAAAGTTGCGGAGAGTACTGAGCAGTTCAGCTAGAATTGGCTTTAACAGGACTGAAAGTACTCTGATATATAGTGTTGGAATGAAACGCTCACACCACAGTTCTGGAAACTTGGACTTGTTGTGGGAAGAAGAGCAAGTGATACCTGAAGTAGTTGATTCTGTCTCTGAATTTTTATCAGCTGAGGATGGTGATACTTTCATTGAAATGGTGAACACCGAAGATGATAATGAACTGGGGGCGATGAAATCTTGTGGAAGTCCAATGTATGTTCGGATTGTGAGCAAGCAAATGGTAGGGATATATGTATCTGTTTGGGTTCAGAGGAGGTTGAGAAGGCACGTTAATAATTTGAAAGTTTCCCCGGTTGGAATTGGTCTTATGGGCTACATGGGAAACAAGGGGTCAGTTTCGATTAGTATGTCTCTCTTCCAGTCACGTCTGTGCTTTGTTTGTTCCCATTTGACTTCTGGTCAGAAGGAAGGGGCTGAACATAGGCGAAACTCTGATGTTCATGAAATTCTCAGACGCACTTGCTTCTCACCTGCCTTTGATGCAGATCAACCGCAAACAATCCCATCTCATGACCAGATTTTCTGGTTCGGGGATTTGAATTATCGTATCAATATGTTGGATGCCAATGTTAGAAAATTGGTGGCTCTAAAGAAGTGGAATGAGTTGATGAATTATGACCAGCTAAGCAAAGAATTGCGTATTGGGCATGTGTTTGATGGATGGAAAGAGGGGTTGATAAACTTCCCACCCACTTACAAGTATGAAATTAACTCTGATAGATATGTGGGTCAGAACCCAAAAGAAGGGGAAAAAAGAAGATCTCCAGCATGGTGTGATCGTATATTGTGGCTAGGAAAAGGAATAAAACAACTACAATATGGACGTGCAGAAATTAAGCTCTCAGATCACAGACCAGTTAGTTCAGCCTTCTTGGTTGAAGTTGAAGTATTTGACCATCGCAAGCTAAAAAGAGCTCTAAATTTCACTAGTGCAGCAGTTCACCCAGGGATCTTCCTTGATGAAGATGGAGAAATATAA 1869 0.4184 MKARRGKRSEAFWPSIVMKKWLNIKPKVNDFSEDEVDTETESEDDACSPRVSRMREDKPPLRTQGVPSKFSSQRSDASCKGQKARHRRGKSETLRAQYINTKEVRVTIGTWNVAGRHPYEDLEIDDWLCTEDPADIYILGFQEVVPLNAGNVLGAEDNTPIQKWEAIIRRSLNKSSEPDSKHKSYSAPPSPVLRTSSAADLLADTMDVDNPIPIDMMIEEFVGTVHNNEVKQQEVKSIIDIQNNLQLRRIYGIDIDWPERSLDAIPQIVDSNSKLRRVLSSSARIGFNRTESTLIYSVGMKRSHHSSGNLDLLWEEEQVIPEVVDSVSEFLSAEDGDTFIEMVNTEDDNELGAMKSCGSPMYVRIVSKQMVGIYVSVWVQRRLRRHVNNLKVSPVGIGLMGYMGNKGSVSISMSLFQSRLCFVCSHLTSGQKEGAEHRRNSDVHEILRRTCFSPAFDADQPQTIPSHDQIFWFGDLNYRINMLDANVRKLVALKKWNELMNYDQLSKELRIGHVFDGWKEGLINFPPTYKYEINSDRYVGQNPKEGEKRRSPAWCDRILWLGKGIKQLQYGRAEIKLSDHRPVSSAFLVEVEVFDHRKLKRALNFTSAAVHPGIFLDEDGEI* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0053 622 MobiDBLite consensus disorder prediction 28 91 - -
Pvu2g0053 622 Gene3D Endonuclease/exonuclease/phosphatase 271 612 IPR036691 -
Pvu2g0053 622 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 618 IPR045849 GO:0004445|GO:0046855
Pvu2g0053 622 MobiDBLite consensus disorder prediction 43 62 - -
Pvu2g0053 622 MobiDBLite consensus disorder prediction 172 191 - -
Pvu2g0053 622 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 618 - -
Pvu2g0053 622 Gene3D Endonuclease/exonuclease/phosphatase 85 188 IPR036691 -
Pvu2g0053 622 SUPERFAMILY DNase I-like 95 606 IPR036691 -
Pvu2g0053 622 SMART i5p_5 289 595 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0053 Pvu-Chr2 615741 620868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0053 361 601 Acyl Lipid Metabolism Gene Families AT2G43900 29.329 1.55e-33 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0053 K24221 - gsj:114422956 1103.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0053 2 615741 620868 Pvu3g2354 3 44882912 44888182 PCT