Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2200 ATGGGCTTCCCAGCCAACGGCGCCTCACCGGAAAACCCCAACAAGTTCCTTATCTACGGCCGTACGGGCTGGATTGGTGGCCTCCTCGGCACCCTCTGCCAGGCCCAAGGCATCGCCTTCGAGTACGCCTCGGGCCGTCTCGAGGACCGGGCCTCCCTCGAAAAGGACATAGCTCAGGTCAAGCCCACCCACGTATTCAACGCCGCTGGAGTCACAGGCCGGCCCAACGTGGACTGGTGCGAATCCCACAAGGTTGAGACCATCCGAACCAACGTCGTCGGAACCCTCACTCTCGCCGACGTCTGCCGCAACCACGGCCTCATCCTCCTCAACTACGCCACCGGTTGCATCTTCGAGTACGATTCCGGTCATCCTCTCGGATCCGGAATCGGGTTCAAAGAGCACGACACTCCCAATTTCACCGGCTCCTTCTACTCTAAGACCAAGGCCATGGTAGAGGAGCTGCTTAAGAACTACGATAATGTGTGTACCTTGCGAGTGAGGATGCCTATCTCGTCTGATTTATCGAATCCGCGCAATTTCATCGCGAAGATCACTCGATACGAGAAGGTTGTGGATATTCCGAATTCCATGAGTATATTGGATGAACTTCTTCCCATCTCCATTGAGATGGCGAAGAGGAATCTGACTGGGATCTGGAACTTCACAAACCCTGGAGTGGTTAGTCACAATGAAATTCTAGAGATGTACAGAGAGTATGTTGACCCCAACTTCACCTGGAAGAACTTCACTCTGGAGGAACAGGCCAAGGTGATTGTTGCCCCCAGGAGCAACAATGAGCTTGATGCCACCAAATTGAAGACGGAATTTCCAGAACTGCTGTCTATCAAGGACTCCCTCGTTAAGTATGTCTTCCAACCCAACCAGAAGGTTAAAGCGTAG 903 0.5327 MGFPANGASPENPNKFLIYGRTGWIGGLLGTLCQAQGIAFEYASGRLEDRASLEKDIAQVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRNHGLILLNYATGCIFEYDSGHPLGSGIGFKEHDTPNFTGSFYSKTKAMVEELLKNYDNVCTLRVRMPISSDLSNPRNFIAKITRYEKVVDIPNSMSILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYREYVDPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELLSIKDSLVKYVFQPNQKVKA* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2200 300 PANTHER BNAC05G13120D PROTEIN 8 296 - -
Pvu3g2200 300 CDD dTDP_HR_like_SDR_e 15 287 - -
Pvu3g2200 300 Pfam RmlD substrate binding domain 15 187 IPR029903 -
Pvu3g2200 300 Gene3D - 6 300 - -
Pvu3g2200 300 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 8 296 - -
Pvu3g2200 300 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 291 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2200 Pvu-Chr3 42874812 42876437 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2200 K12451 - gmx:100781643 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2200 3 42874812 42876437 Pvu3g2200 3 42874812 42876437 ECH
Pvu3g2200 3 42874812 42876437 Pvu2g1581 2 29461367 29462745 PCT