Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1581 ATGGGTGCAGAAGCAGATGGCGGCGAGAAGCAACTGAAATTTCTGATCTACGGCCGAACCGGTTGGATTGGTGGTTTCCTGGGTAAGCTGTGCGAAGAGCGAGGGATCCAATATGAGTACGGAAGCGGGAGATTGGAGAACCGGTTGTCCTTGGAGGCGGACATAACGGCGGTGAAGCCCAGCCACGTGTTCAACGCCGCCGGAGTGACCGGTAGGCCGAACGTGGACTGGTGCGAATCTCACAAGGCTGAAACCATCCGCACCAACGTGGTGGGCACTCTCACCCTGGCCGACGTCTGCCGTCAAAACAACCTCATTCTGATAAACTATGCCACCGGCTGCATCTTCGAGTACGACTCCTCCCACACCCTGGGATCCGGCCACGGCTTCAAGGAAGACGACACTCCCAACTTCACCGGATCCTTCTACTCCAAGACCAAGGCCATGGTGGAGGATCTGCTTGAGAACTACGACAACGTGTGCACGTTGCGTGTGAGGATGCCCATTTCCTCGGATTTGACGAACCCCCGCAACTTCATCACCAAGATCACTCGATACGACAAGGTTGTCGACATTCCGAACTCCATGAGCATACTGGACGAGCTCCTCCCGATCTCGCTGGAGATGGCGAAGAGGAATCTGACTGGGATCTGGAATTTCACGAACCCCGGCGTGGTAAGCCACAACGAGATTCTGGAGATGTACAGGGATTACGTGGATCCCAGCTTCAGGTGGAAGAACTTCACCCTGGAGGAGCAGGCTAAGGTGATTGTTGCTCCCAGAAGCAACAACGAGCTTGATGCCTCTAAGTTGAAGAAGGAGTTTCCTCACCTTCTTTCCATCAAGGACTCTCTTCTTAAGTACGTCTTTCACCCCAATCACCATAACCCTGCACTCCTTCAACCTTCTTAG 912 0.5406 MGAEADGGEKQLKFLIYGRTGWIGGFLGKLCEERGIQYEYGSGRLENRLSLEADITAVKPSHVFNAAGVTGRPNVDWCESHKAETIRTNVVGTLTLADVCRQNNLILINYATGCIFEYDSSHTLGSGHGFKEDDTPNFTGSFYSKTKAMVEDLLENYDNVCTLRVRMPISSDLTNPRNFITKITRYDKVVDIPNSMSILDELLPISLEMAKRNLTGIWNFTNPGVVSHNEILEMYRDYVDPSFRWKNFTLEEQAKVIVAPRSNNELDASKLKKEFPHLLSIKDSLLKYVFHPNHHNPALLQPS* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1581 303 Pfam RmlD substrate binding domain 13 184 IPR029903 -
Pvu2g1581 303 CDD dTDP_HR_like_SDR_e 13 285 - -
Pvu2g1581 303 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 289 IPR036291 -
Pvu2g1581 303 PANTHER BNAC05G13120D PROTEIN 10 294 - -
Pvu2g1581 303 Gene3D - 4 298 - -
Pvu2g1581 303 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 10 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1581 Pvu-Chr2 29461367 29462745 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1581 K12451 - gmx:100787499 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1581 2 29461367 29462745 Pvu2g1581 2 29461367 29462745 ECH
Pvu3g2200 3 42874812 42876437 Pvu2g1581 2 29461367 29462745 PCT