Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2192 ATGCCCTCTACTTTCTGTGAAAGGAATGAGGGCCACCCAAACGTATCGAATTCCCCGTTACAGGATGAGACCAACATGTTCACCACTTTGATCCCCAAATCCCCAACATGTCAACACCATCATCACCAAACACAAAATCCCCACAAAACCCATTTGTCTCTGGCCCTCAGCGAAGCCAAGTGCATTTCCAGTATATCTTTCTCCATGATCCTAACTGGCCTATTACTCTATTCCCGCTCCATGATCTCCATGCTCTTCCTCGGCCACCTCGGAGAACTCGCTCTCGCAGGTGGCTCCTTGGCCATCGGATTCGCCAACATCACTGGCTACTCTGTTCTCTCTGGCCTCGCCATGGGAATGGAACCCATCTGCGGGCAGGCCTTCGGAGCCAAAAGGTTCAAACTTCTCGGCCTCACCATGCAGAGAACCGTGCTCCTTCTTCTCCTAACTTCACTTTTCATCTCATGCTTCTGGCTCAACATCAAGAAACTATTACTCCTGTGTGGCCAAGAAGAAGACATAGCCAATGAGGCACAGTTCTATATATATTACACTCTCCCAGATCTTGTATTACAATCGCTGCTGCACCCTCTAAGAATCAATCTTCGAAGCCAATCAATAACTCTTCCTCTCACGTGCATCGCCGCTCTCTCCATTATCCTCCACGTGCCCATCAACTACCTCTTTGTCTCCGTCCTCAATCTCGGAATCCGAGGCATCGCGATAAGCGCTGTTATCACAAACTTCAACCTCGTCTTGTCGTTGGTTATTTACGTTGTGGTATCAGGCACGCATAAGAAAACGTGGCCGGGTATTTCCTGGTCGTGCTTCAAGGGGTGGAAAAGGCTCTTGAATCTCGCGATTCCGAGTTGTGTTTCTGTTTGTCTGGAATGGTGGTGGTACGAGATAATGATTTTACTGTGCGGGTTGTTAGTGAACCCTCATGCAAGCGTTGCCTCCATGGGGGTTTTGATTCAAACCACGGCTTTGATATACATTTTTCCGTCGTCTTTAAGTTTTGGAGTGTCAACGCGTGTTGGAAACGAGTTGGGTGCGGGGAATCCTGGGAGGGCGAAAATTGCGGCGATTGTGGGACTCTGTTTCAGTTTCGTGTTGGGTTTCTCTGCTTTGGTGTTCGCGATTTCGGTGAGAAAGGTTTGGGCGACGATGTTCACAGGGGATGGAGAAATCCTTGCTTTGACGTCGATGGTGTTGCCTATCATCGGGCTTTGCGAGCTCGGGAACTGTCCCCAAACAACGGTTTGCGGCGTTTTGAGGGGGACGGCTCGGCCGAAATTGGGGGCGAACATAAACTTGGGTTGCTTCTACCTTGTGGGCATGCCCGTTGCGGTGTGGTTGGGATTCTTTGCTGGGTTTGACTTCAAAGGATTGTGGCTGGGGATGTTGGCGGCGCAAGGGTCTTGTATGATCACAATGATGTTCGTTTTGGCGCGGACCAATTGGGAGGGTCAAGCTTTGAGAGCTAAGGAACTCACTTCTTGTGATTCTAACGAGGAGAAAAAACTAGTGGACGAGGAAGAACAAGAGAAAGAGGAGAAAGGTTTTTTGGGATCATGTGCCACCAAACAACCCTCTGATTTAGCTGTTTGA 1611 0.4941 MPSTFCERNEGHPNVSNSPLQDETNMFTTLIPKSPTCQHHHHQTQNPHKTHLSLALSEAKCISSISFSMILTGLLLYSRSMISMLFLGHLGELALAGGSLAIGFANITGYSVLSGLAMGMEPICGQAFGAKRFKLLGLTMQRTVLLLLLTSLFISCFWLNIKKLLLLCGQEEDIANEAQFYIYYTLPDLVLQSLLHPLRINLRSQSITLPLTCIAALSIILHVPINYLFVSVLNLGIRGIAISAVITNFNLVLSLVIYVVVSGTHKKTWPGISWSCFKGWKRLLNLAIPSCVSVCLEWWWYEIMILLCGLLVNPHASVASMGVLIQTTALIYIFPSSLSFGVSTRVGNELGAGNPGRAKIAAIVGLCFSFVLGFSALVFAISVRKVWATMFTGDGEILALTSMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPVAVWLGFFAGFDFKGLWLGMLAAQGSCMITMMFVLARTNWEGQALRAKELTSCDSNEEKKLVDEEEQEKEEKGFLGSCATKQPSDLAV* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2192 536 Pfam MatE 69 228 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu3g2192 536 Pfam MatE 289 452 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu3g2192 536 PANTHER PROTEIN DETOXIFICATION 38 511 - -
Pvu3g2192 536 PANTHER MULTIDRUG RESISTANCE PROTEIN 38 511 - -
Pvu3g2192 536 CDD MATE_eukaryotic 58 492 IPR045069 GO:0042910|GO:1990961
Pvu3g2192 536 MobiDBLite consensus disorder prediction 505 523 - -
Pvu3g2192 536 MobiDBLite consensus disorder prediction 1 21 - -
Pvu3g2192 536 MobiDBLite consensus disorder prediction 505 536 - -
Pvu3g2192 536 TIGRFAM matE: MATE efflux family protein 70 465 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2192 Pvu-Chr3 42767617 42769452 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2192 K03327 - gmx:100778250 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2192 3 42767617 42769452 Pvu3g2192 3 42767617 42769452 ECH
Pvu3g2192 3 42767617 42769452 Pvu2g1592 2 29626118 29628239 PCT