Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1592 ATGTGTGAGTTATCATCGTCTACCCCCACTTTGGGTGAGAGCAATGAGGGTCATTCACACACGCACACGACCAAAATTAAGGAGCCTGACATGTTAGCCCTTTTGATCCCCAAACCCCCAACAACATTCCAGCAACCCCAAAAAAACCAAAAGCCCCATGAAACCACCCATTTTTCCCTGGCTTTCAACGAAGCCAAATGCATAGCAAACACAGCATTACCCATGGTTCTCACAGGTCTATTACTCTACTCTCGCTCTGTCATCTCTATGTTGTTCCTTGGTCGTGCCGGTGACCTTGCCTTAGCTGGTGGTTCTCTCGCCATTGGATTCGCCAACATCACAGGTTACTCTATTCTCTCAGGCCTCGCCATGGGCATGGAGCCCATCTGCGTCCAGGCTTTTGGGGCCAAAAGATTCAAACTTTTGGGCTTTGCCATGCAGAGGACAATAGTTCTTCTTCTTTTAACTTCAATTTTTATATCGTTCTTGTGGCTCAACATGAAGAACATATTGCTCCTCTGTGGCCAACAAGAAGACATCGCCACCCAAGCTCAATCATTCATACTCTATTCTCTGCCTGATCTCGTAGCACAATCATTGCTACACCCTCTGCGAATCTACTTACGAAGTCAATCCATAACCCTGCCTCTCACATACTCTGCCTTTCTCTCTATTCTCCTTCACCTCCCCATCAACTACCTCCTCGTCTCTGTCTTCAAACTTGGAATCAAAGGCATTGCTTTAGGCGCTGTTTGGACCAATTTCAACCTCGTCTTTTCGTTGCTTCTCTACATCTGGCTCTCCGGCATATACAGCAAAACATGGACTCGTATTTCTTTGAAGGGCATCTTCTGCGGTTGGAAGGCGCTTTTGAATTTGGCAATTCCAAGTTGCATTTCCGTTTGCCTGGAATGGTGGTGGTACGAAATCATGATTTTACTATGCGGGTTACTGATCAATCCCCAAGCAACCGTTGCATCCATGGGGGTTCTGATTCAAACCACCGCTTTGATATACATTTTCCCATCGTCTCTGAGCTTTGCGGTTTCAGCACGTGTTGGGAACGAAGTGGGTGCGGAGAATCCCAAAAGGGCCAAACTTGCAGCACTGGTGGGGCTTTTTTTCAGTTACGTCATGGGCTTGTCGGCCTTGTTTTTTGCTGTTTCGGTGAGGCACGTGTGGGCATCCATGTTCACACGTGACGCGGAGATCATTGCTTTGACGGCGACGGTGTTGCCCATCATTGGTCTCTGCGAGCTTGGAAATTGTCCTCAAACAACTGTCTGCGGCGTTCTGAGGGGAACCGCGAGACCCAAGTTGGGAGCCAATATAAATTTGGGTTGCTTTTATATTGTGGGAATGCCCATTGCTGTGTGGTTGGGTTTCTTTGCGGGCTTTGACTTCAAAGGCTTGTGGCTGGGTTTGTTGGCCGCACAAGCCTCGTGCATGATCACCATGTTGTTCGTGTTGGCTCGCACCAACTGGGAGGATCAGGTCCAAAGAGCCAAACAACTCACATCGTCTGATGCTACTGAGGAGGAACAGGAACAGGAACATCATGGCAATTCCTCAGCGGAGGAATGCTCTGATTCAAATGTTTGA 1602 0.4819 MCELSSSTPTLGESNEGHSHTHTTKIKEPDMLALLIPKPPTTFQQPQKNQKPHETTHFSLAFNEAKCIANTALPMVLTGLLLYSRSVISMLFLGRAGDLALAGGSLAIGFANITGYSILSGLAMGMEPICVQAFGAKRFKLLGFAMQRTIVLLLLTSIFISFLWLNMKNILLLCGQQEDIATQAQSFILYSLPDLVAQSLLHPLRIYLRSQSITLPLTYSAFLSILLHLPINYLLVSVFKLGIKGIALGAVWTNFNLVFSLLLYIWLSGIYSKTWTRISLKGIFCGWKALLNLAIPSCISVCLEWWWYEIMILLCGLLINPQATVASMGVLIQTTALIYIFPSSLSFAVSARVGNEVGAENPKRAKLAALVGLFFSYVMGLSALFFAVSVRHVWASMFTRDAEIIALTATVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYIVGMPIAVWLGFFAGFDFKGLWLGLLAAQASCMITMLFVLARTNWEDQVQRAKQLTSSDATEEEQEQEHHGNSSAEECSDSNV* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1592 533 MobiDBLite consensus disorder prediction 1 24 - -
Pvu2g1592 533 TIGRFAM matE: MATE efflux family protein 74 472 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu2g1592 533 Pfam MatE 296 459 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu2g1592 533 Pfam MatE 74 234 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu2g1592 533 MobiDBLite consensus disorder prediction 503 533 - -
Pvu2g1592 533 PANTHER PROTEIN DETOXIFICATION 43 515 - -
Pvu2g1592 533 MobiDBLite consensus disorder prediction 507 525 - -
Pvu2g1592 533 MobiDBLite consensus disorder prediction 1 17 - -
Pvu2g1592 533 PANTHER MULTIDRUG RESISTANCE PROTEIN 43 515 - -
Pvu2g1592 533 CDD MATE_eukaryotic 64 501 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1592 Pvu-Chr2 29626118 29628239 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1592 K03327 - gmx:100811560 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1592 2 29626118 29628239 Pvu2g1592 2 29626118 29628239 ECH
Pvu3g2192 3 42767617 42769452 Pvu2g1592 2 29626118 29628239 PCT