Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu3g2113 | ATGGATCCCCACCCAGGAACCTTCCCCGTTCTCTCCTACGTCATGTCCCGTCTCCCTTCCTTCGGCCCTAGATCACCCACCTCCTCCGCCTCCGCCACCGCCACCGCCTCCTCCTCCGCCTCCACTTCCAAATCCCATCACGTCGACATCGAACAGCCATCTCCCTCCTACCCTTCCTCTTCCTCTTCCTCTTCCTCCATCGTGGGCCAAATGCCCAATCTAGCCGACCCGGCAATGCTGGCTTCCATGACCCGCGCCATTTCCGACGTCGCCCAGGCCCGATCCGTCTTCAAGGTCATGGGGCCCCGGCCCACCCATGAGGAGGTCGACGAGGCCAAGGCCAAGCTGGTGGACCTCGAAGCCCACCTGTCCCGCCAACTGGAAGAGATCGTGGGCATGCCCAGGCCCCCGGAGATCGACGAGGCCCGCTGGGTTGCCCACCTCGCGGAGAAGGAGAAGGCCACCAAGGAATCCACGGAGAAAGAGAAGCGCATTTTGAAGTCCCTCATTCAGCTCGACAACATGCACGACGCCTACGGAAAGCTCCTCAAGGACGCTGAGAAGCGCTTGGTCAAGATTTACGAGAACGCCAACAACGACGACAATGAGAACGACGAGGTCGAGGACGACAAAGAAGTTAGCCAAGTGAAAGAACAGGTTGAGGGGATTTTGCAAGAGGCCTACGGAAAAGGGGTGGAACGAATCGCTCTCTCCGGCAAGCGCCTCAAGTACCTTCCTGAAGCATTTGGCCACATTCCTGCATTGGTCGTCCTCGACGTCTCCACCAATCAACTTTCGGTGATTCCTGATTCCATATGTGGATTGGAAAATCTCGAGGAGCTTAATATCTCTTCCAATGCTCTGGAGTCTCTGCCAGATTCAATTGGCTTGTTGCAGAAGTTGAAGGTCCTCAATGTTTCCGGAAACAAGCTGTGTGCTCTTCCTGATTCCATTAGTAAGTGCAGTTCATTGGTGGAGCTAGATGCAAGCTTTAACAGCCTGTCGTATTTGCCAACAAACATTGGATATGAGTTGCGTAATTTACAGAAGCTTCTGATTCAGTTGAACAAGATTCGATCTTTTCCCTCATCAATCTGTGAGATGAAATCCTTGCGCTATCTGGATGCTCACTTTAACGAGCTGCGCGGGCTTCCTGTTGCGGTTGGGAAATTGACTAGTCTTCAAGTTCTAAACCTGAGCAGTAACTTCAGTGACCTCAGAGAACTTCCAGAGACATTTGGTGATTTGATCAACCTCAGGGAGTTGGATCTCAGCAACAACCAAATTCATGCACTTCCTGATTCTTTTGGTCGCCTTCATAACTTGACCAAGCTAAACTTGGATCAGAATCCTCTTGAAGTGCCACCTGTGGATCTTGTGGATCAAGGGGTCCAAGCAGTAAAGAGCTTCATGTCTCGGAGATGGATTGATATATTGGCGGAGGAAGAAAGAAAAACCACCCAGGAAATGCAAGAACAGGGAGATAATGGGTGGTTAACGCGAAGCACCTCTTGGCTGAAGAATGTTTCTGATAATGTATCTGATATGATTATGTCCCCAAAAACTCCCAAGGAAGCGTATCTTAATCAGCAGCTATGA | 1599 | 0.5134 | MDPHPGTFPVLSYVMSRLPSFGPRSPTSSASATATASSSASTSKSHHVDIEQPSPSYPSSSSSSSSIVGQMPNLADPAMLASMTRAISDVAQARSVFKVMGPRPTHEEVDEAKAKLVDLEAHLSRQLEEIVGMPRPPEIDEARWVAHLAEKEKATKESTEKEKRILKSLIQLDNMHDAYGKLLKDAEKRLVKIYENANNDDNENDEVEDDKEVSQVKEQVEGILQEAYGKGVERIALSGKRLKYLPEAFGHIPALVVLDVSTNQLSVIPDSICGLENLEELNISSNALESLPDSIGLLQKLKVLNVSGNKLCALPDSISKCSSLVELDASFNSLSYLPTNIGYELRNLQKLLIQLNKIRSFPSSICEMKSLRYLDAHFNELRGLPVAVGKLTSLQVLNLSSNFSDLRELPETFGDLINLRELDLSNNQIHALPDSFGRLHNLTKLNLDQNPLEVPPVDLVDQGVQAVKSFMSRRWIDILAEEERKTTQEMQEQGDNGWLTRSTSWLKNVSDNVSDMIMSPKTPKEAYLNQQL* | 533 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu3g2113 | 532 | ProSiteProfiles | Leucine-rich repeat profile. | 418 | 439 | IPR001611 | GO:0005515 | |
| Pvu3g2113 | 532 | Pfam | Leucine rich repeat | 410 | 452 | IPR001611 | GO:0005515 | |
| Pvu3g2113 | 532 | Pfam | Leucine rich repeat | 277 | 334 | IPR001611 | GO:0005515 | |
| Pvu3g2113 | 532 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING | 35 | 521 | - | - | |
| Pvu3g2113 | 532 | ProSiteProfiles | Leucine-rich repeat profile. | 277 | 298 | IPR001611 | GO:0005515 | |
| Pvu3g2113 | 532 | SMART | LRR_typ_2 | 275 | 297 | IPR003591 | - | |
| Pvu3g2113 | 532 | SMART | LRR_typ_2 | 345 | 368 | IPR003591 | - | |
| Pvu3g2113 | 532 | SMART | LRR_typ_2 | 252 | 274 | IPR003591 | - | |
| Pvu3g2113 | 532 | SMART | LRR_typ_2 | 416 | 438 | IPR003591 | - | |
| Pvu3g2113 | 532 | SMART | LRR_typ_2 | 439 | 462 | IPR003591 | - | |
| Pvu3g2113 | 532 | SMART | LRR_typ_2 | 391 | 415 | IPR003591 | - | |
| Pvu3g2113 | 532 | SMART | LRR_typ_2 | 322 | 344 | IPR003591 | - | |
| Pvu3g2113 | 532 | SMART | LRR_typ_2 | 298 | 321 | IPR003591 | - | |
| Pvu3g2113 | 532 | Coils | Coil | 183 | 203 | - | - | |
| Pvu3g2113 | 532 | Gene3D | Ribonuclease Inhibitor | 336 | 404 | IPR032675 | - | |
| Pvu3g2113 | 532 | Gene3D | Ribonuclease Inhibitor | 146 | 335 | IPR032675 | - | |
| Pvu3g2113 | 532 | MobiDBLite | consensus disorder prediction | 21 | 70 | - | - | |
| Pvu3g2113 | 532 | SUPERFAMILY | L domain-like | 219 | 457 | - | - | |
| Pvu3g2113 | 532 | MobiDBLite | consensus disorder prediction | 19 | 70 | - | - | |
| Pvu3g2113 | 532 | Gene3D | Ribonuclease Inhibitor | 405 | 462 | IPR032675 | - | |
| Pvu3g2113 | 532 | PANTHER | PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 1 | 35 | 521 | - | - | |
| Pvu3g2113 | 532 | SMART | LRR_bac_2 | 252 | 271 | - | - | |
| Pvu3g2113 | 532 | SMART | LRR_bac_2 | 275 | 294 | - | - | |
| Pvu3g2113 | 532 | SMART | LRR_bac_2 | 321 | 340 | - | - | |
| Pvu3g2113 | 532 | SMART | LRR_bac_2 | 298 | 317 | - | - | |
| Pvu3g2113 | 532 | SMART | LRR_bac_2 | 391 | 412 | - | - | |
| Pvu3g2113 | 532 | SMART | LRR_bac_2 | 416 | 435 | - | - | |
| Pvu3g2113 | 532 | SMART | LRR_bac_2 | 368 | 387 | - | - | |
| Pvu3g2113 | 532 | SMART | LRR_bac_2 | 345 | 364 | - | - | |
| Pvu3g2113 | 532 | Coils | Coil | 109 | 129 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu3g2113 | Pvu-Chr3 | 41958638 | 41961141 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pvu3g2113 | 245 | 491 | Receptor kinase-like Gene Family | AT5G56040 | 29.276 | 4.15e-16 | 80.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu3g2113 | - | - | vun:114179436 | 854.358 |
Event-related genes