Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2066 ATGGGGTTGCCACGTGGCATCGTAGAGTGCTTTAACGAATTCGAAAAAAACAAAGAAAAAGACCAATTGATTCCGGTTCCTAGGGAATCAAATATGGGAGTTAATGATGAAAGGGGAGTAAATGTAATGAATAGGTTTGGCTACACGTCACCCTTTAAGGGAAGCTCAACTCAAAAGAGTTCCTTGAGTCTACAAAGACGGCAAAGTATTGGTCCAGCTTTTGGTGTTGAGAGGGTGGTTGACAGCCCCTCAATTCAACAGCTTCTTGGAAATGTTTGTAACATGCAGAGCTCTGGTCAATCATCCTCAGGTCGAAGTTTTGGATCCGATGGCAGTGAGTCTAGATCCTATTCAAAATTGTTCTATCTATTCGGACGGCAGAAGAGAGAGGTGGAGATAGTGAAAGATGAAGTGGAGAAGAAACAGGAGAATTCTAGCAGCGAAGCTTCTTCCGCAATGAGTAGTTTGTCCAATGATAAGAAGCTAGACAAGGTGGGTGGTGAGACACAAAAGCCAAAGAAAGCATCACAATCACAATTGTTCCCAGAAAGTCCATCAAAGTCAAGAACAATAGGAAAAGGCCCTCCTGCAAAGCCTCCTGTTGATAGGAAGAATGACAGCCCTTTGAGAAAACAAACCACAGGTATACCCCGTGTGAAAAAAACTGTTGGTGGAAGATCAATGTCACAAGGTCAAATTGATATTTTCTCTGGACCAGCATTGGATAGGCCTGAACTGGGACATGCCTTACTAAACCAAGCAAGGGACATGATTTCATCAGGAAATAATCCGAAGAGAGCTCTTGAATTAGCCCTTCAAGCAAAGAAATTGTTCGAGAGAACTGCTGCTTATGGGAGACCAAGTTTGGATTTGGCCATGTGTTTACATGTTACTGCAGTAATATATTGCACTTTGGGCGATTTCAATGAAGCAATTCCGATAGTAAAGCGCTCAATTGAGATTCCTGTGATTGAGGAAGGCCAACAGCACGCCATTGCTAAATTTGCTGGTCACATGCATCTAGGAGACATTTATGCTATGTTGGGCCAGCTGGAGAAGTCAATTAAGTGCTACACTGCAGGGTTAGAAGTTCAAAGGAAGGTTTTGGGAGAAACAGACCCAAGAGTTGGTGAAACCTGTAGGTATGTGGCTGAGGCTAACTTTCAAGCTTTACAATTTGAGGAGGCAGAGAGGATGTGCCAAATTGCCCTTGATATCCACAGAGCAAATGGTTCACCCTCATCTCTTGAAGAGGCAGCTGATAGGAGGCTAATGGGACTTATATGTGAAGCAGATGGTAAACATGAAGCAGCCCTAGAGCATCTTGTCTTGGCCAGCATGGCAATGGTAGCAAATGGACAAGAAGTGGAAGTGGCATCTGTTGACTGCAACATTGGAGATACATTCGTATCCTTGGCTAGATATGATGAGGCCATCTTTGCGTATAAGAGAGCATTGAAAGTTTTCAAGATCCACAAAGGTGAGAACAATCCTGCAGTGGGATCAGTTTTTGTACGTTTGGCTAACTTGTATTGTAGGACATGGAAGATTAGGGAGTCAAAATCATATTGCGGGGATGCACTTAAAATCTATGAGAATCCCATGCCTGGGGTCCCTCCAGAAGAGACTGCAAGCGGTTTAATGAATGTCTCGGCCATCTACGAGTCAATGAATGAGCTAGAAGAGGCACTTAAGTTACTTCAGGAGGCGCTAACCATACTTAATGATGTTCCTGGTCAGATGAACACAATAGCAGGAATTGAAGCTCAGATGGGGGTCATGTACTATGTGTTGAAAAACTACACAGAATCTTATAACACTCTCAAGAACGCCGTGTCCAAGCTTCGTGCTACTGGAGAAAAGAAATCAGCCTTCTTTGGTACTGTTCTTAATCAAATGGGACTTGCTTGTGTGCAACTCCATTCCCTGGATGAGGCTGCAGAATTATTTGAAGAAGCAAGGGTCATTTTGGAACAAGAGAATGGACCCTATCACACAGAAACACTAGGAGTATCTGGCAATCTTGCTGGCACGTATGATGCAATTGGAAGGCTGGATGAGGCAATTGAAATTCTTGAAAACATTGTGGTAATGAGGGAGGAAAAGCTTGGGACAGCAAATCCTGATGTTGCTGATGAGAAGAGAAGGTTGGAGGAGTTGTTAAAGGAAACAGGCAAAGTTCGGAACAGAAAAACCAAGTCACTGGAGAACCTTTTTGATCATGATTACATATGA 2235 0.4327 MGLPRGIVECFNEFEKNKEKDQLIPVPRESNMGVNDERGVNVMNRFGYTSPFKGSSTQKSSLSLQRRQSIGPAFGVERVVDSPSIQQLLGNVCNMQSSGQSSSGRSFGSDGSESRSYSKLFYLFGRQKREVEIVKDEVEKKQENSSSEASSAMSSLSNDKKLDKVGGETQKPKKASQSQLFPESPSKSRTIGKGPPAKPPVDRKNDSPLRKQTTGIPRVKKTVGGRSMSQGQIDIFSGPALDRPELGHALLNQARDMISSGNNPKRALELALQAKKLFERTAAYGRPSLDLAMCLHVTAVIYCTLGDFNEAIPIVKRSIEIPVIEEGQQHAIAKFAGHMHLGDIYAMLGQLEKSIKCYTAGLEVQRKVLGETDPRVGETCRYVAEANFQALQFEEAERMCQIALDIHRANGSPSSLEEAADRRLMGLICEADGKHEAALEHLVLASMAMVANGQEVEVASVDCNIGDTFVSLARYDEAIFAYKRALKVFKIHKGENNPAVGSVFVRLANLYCRTWKIRESKSYCGDALKIYENPMPGVPPEETASGLMNVSAIYESMNELEEALKLLQEALTILNDVPGQMNTIAGIEAQMGVMYYVLKNYTESYNTLKNAVSKLRATGEKKSAFFGTVLNQMGLACVQLHSLDEAAELFEEARVILEQENGPYHTETLGVSGNLAGTYDAIGRLDEAIEILENIVVMREEKLGTANPDVADEKRRLEELLKETGKVRNRKTKSLENLFDHDYI* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2066 744 ProSiteProfiles TPR repeat profile. 544 577 IPR019734 GO:0005515
Pvu3g2066 744 Coils Coil 640 660 - -
Pvu3g2066 744 Pfam Tetratricopeptide repeat 463 488 IPR019734 GO:0005515
Pvu3g2066 744 Pfam Tetratricopeptide repeat 628 693 - -
Pvu3g2066 744 MobiDBLite consensus disorder prediction 137 215 - -
Pvu3g2066 744 Pfam Tetratricopeptide repeat 543 573 - -
Pvu3g2066 744 SUPERFAMILY TPR-like 292 573 IPR011990 GO:0005515
Pvu3g2066 744 SMART tpr_5 501 534 IPR019734 GO:0005515
Pvu3g2066 744 SMART tpr_5 377 410 IPR019734 GO:0005515
Pvu3g2066 744 SMART tpr_5 335 368 IPR019734 GO:0005515
Pvu3g2066 744 SMART tpr_5 669 702 IPR019734 GO:0005515
Pvu3g2066 744 SMART tpr_5 585 618 IPR019734 GO:0005515
Pvu3g2066 744 SMART tpr_5 292 325 IPR019734 GO:0005515
Pvu3g2066 744 SMART tpr_5 544 577 IPR019734 GO:0005515
Pvu3g2066 744 SMART tpr_5 459 492 IPR019734 GO:0005515
Pvu3g2066 744 SMART tpr_5 627 660 IPR019734 GO:0005515
Pvu3g2066 744 ProSiteProfiles TPR repeat profile. 459 492 IPR019734 GO:0005515
Pvu3g2066 744 PANTHER KINESIN LIGHT CHAIN 41 741 - -
Pvu3g2066 744 MobiDBLite consensus disorder prediction 91 112 - -
Pvu3g2066 744 Gene3D Tetratricopeptide repeat domain 445 624 IPR011990 GO:0005515
Pvu3g2066 744 Gene3D Tetratricopeptide repeat domain 240 444 IPR011990 GO:0005515
Pvu3g2066 744 Gene3D Tetratricopeptide repeat domain 628 735 IPR011990 GO:0005515
Pvu3g2066 744 Coils Coil 598 618 - -
Pvu3g2066 744 Coils Coil 124 144 - -
Pvu3g2066 744 Coils Coil 550 577 - -
Pvu3g2066 744 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 41 741 - -
Pvu3g2066 744 Pfam MalT-like TPR region 260 458 IPR041617 -
Pvu3g2066 744 SUPERFAMILY TPR-like 499 697 IPR011990 GO:0005515
Pvu3g2066 744 Coils Coil 710 730 - -
Pvu3g2066 744 MobiDBLite consensus disorder prediction 171 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2066 Pvu-Chr3 41325333 41328635 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2066 - - gmx:100813461 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2066 3 41325333 41328635 Pvu9g1848 9 26247950 26252337 ECH
Pvu3g2066 3 41325333 41328635 Pvu3g2066 3 41325333 41328635 ECH
Pvu3g2066 3 41325333 41328635 Pvu9g1848 9 26247950 26252337 PCT