Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1991 ATGGGGAATCTTTTGTGTTGTGTGCAAGTTGAGCAATCTACAGTGGCTGTAAAAGAAGGATTTGGACGATTTGAGCAGGTGCTTCAGCCAGGATGCCATTGCATGCCATGGTTCCTTGGCAAACAAGTTGCTGGTCATCTCTCTCTTCGACTACAACAATTGGATCTTCGATGTGAGACCAAGACAAAGGATAATGTCTTTGTTAATGTTGTTGCGTCAATTCAATATCGTGCCCTGGCAGAGAAGGCCAATGATGCTTTTTACAAACTCAGCAATACAAAAACCCAACTTCAGGCATATGTTTTTGATGTAATTAGGGCAAGTGTTCCAAAGCTCAACTTGGATGATGCTTTTGAGCAGAAAAATGATATTGCCAAAGCTGTGGAAGAAGAACTTGAGAAGGCTATGTCAGCTTATGGGTACGAAATTGTTCAAACACTGATTGTTGATATAGACCCAGATGAGCATGTGAAGCGAGCTATGAATGAAATCAATGCTGCTGCAAGATTGAGGGTGGCAGCTAATGAGAAGGCAGAGGCAGAGAAGATCTTGCTAATTAAACGAGCTGAGGGTGAGGCTGAATCTAAATATCTCTCTGGGATGGGTATTGCTCGCCAACGTCAAGCAATTGTGGATGGATTGAGAGATAGTGTGCTTGGATTCTCAGTCAATGTACCTGGGACGACTGCCAAAGATGTTATGGACATGGTCCTGGTTACTCAGTATTTTGACACCCTGAAAGAAATTGGCGCTGCCTCCAAGTCTTCTTCTGTATTCATTCCACATGGACCTGGTGCTGTTCGTGAAGTTGCTTCCCAAATTCGTGATGGCCTTCTTCAGGCTTCTCATCACTAG 855 0.4374 MGNLLCCVQVEQSTVAVKEGFGRFEQVLQPGCHCMPWFLGKQVAGHLSLRLQQLDLRCETKTKDNVFVNVVASIQYRALAEKANDAFYKLSNTKTQLQAYVFDVIRASVPKLNLDDAFEQKNDIAKAVEEELEKAMSAYGYEIVQTLIVDIDPDEHVKRAMNEINAAARLRVAANEKAEAEKILLIKRAEGEAESKYLSGMGIARQRQAIVDGLRDSVLGFSVNVPGTTAKDVMDMVLVTQYFDTLKEIGAASKSSSVFIPHGPGAVREVASQIRDGLLQASHH* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1991 284 Pfam SPFH domain / Band 7 family 9 182 IPR001107 -
Pvu3g1991 284 PANTHER HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1-LIKE 1 284 - -
Pvu3g1991 284 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 1 284 - -
Pvu3g1991 284 Coils Coil 118 138 - -
Pvu3g1991 284 SMART PHB_4 5 165 IPR001107 -
Pvu3g1991 284 CDD SPFH_like_u4 10 278 - -
Pvu3g1991 284 Gene3D Band 7 domain 41 167 IPR036013 -
Pvu3g1991 284 SUPERFAMILY Band 7/SPFH domain 45 171 IPR036013 -
Pvu3g1991 284 Coils Coil 157 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1991 Pvu-Chr3 40507850 40511236 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1991 - - gmx:100804982 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1991 3 40507850 40511236 Pvu2g0685 2 7799949 7802181 ECH
Pvu3g1991 3 40507850 40511236 Pvu3g1991 3 40507850 40511236 ECH