Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0685 ATGGGACAGGTGTTTGGATGCGTCCAAGTGGAGCAGTCAAGTGTGGCCATCAGAGAAGTTTTCGGCAAGTACGATGATGTTCTTGAGCCTGGTTGCCACTGTGTGCCATGGTGTCTTGGCAGTCGTGTTGCTGGTGCCCTTTCTTTGCGTGTCAAACAGCTTGATGTTCGGTGTGAAACCAAGACAAAGTGTCTTTCTTTAAGTGGTTTAAGCAAGTGGACAATGTGTTTTGTTACTGTGGTTGCTTCTATCCAATATCGAGCATTGGCAGAAAACGCAGTGGATGCTTACTACAAACTCAGCAATACCAGAGCACAAAAACAATCCTATGTCTTTGATGTTATCAGAGCAAGTGTTCCAAAGATGGAACTAGATGCTACGTTTGAACAGAAGAATGAAATTGCTAAAGCTTATGGTTACGATATAGTTCAGACTCTTATTGTGGATATAGAGCCAGATGAGCATGTGAAGAGAGCCATGAATGAGATAAATACTGGGTCAGAGAAGATATTGCAGATAAAGCGAGCAGAAGGGGATGCAGAATCAAAGTACCTAGCAGGGCTTGGAGTTGCTCGTCAGCGGCAAGCCATAGTTGATGGGCTGAGGGACAGTGTGTTAGCTTTCTCTGAGAATGTGCCTGGGACAACATCAAAGGATATCATGGATATGGTTCTCATAACCCAATATTTTGACACAATAAAGGAAATTGGTGCATCCTCCAAATCCAATGCTGTTTTCATTCCACATGGACCTGGTGCTGTTCAAGATGTTGCTTCACATATTAGAGACGGTCTTCTCCAAGGAAATGCAACACAGTGTTCGTGA 825 0.4376 MGQVFGCVQVEQSSVAIREVFGKYDDVLEPGCHCVPWCLGSRVAGALSLRVKQLDVRCETKTKCLSLSGLSKWTMCFVTVVASIQYRALAENAVDAYYKLSNTRAQKQSYVFDVIRASVPKMELDATFEQKNEIAKAYGYDIVQTLIVDIEPDEHVKRAMNEINTGSEKILQIKRAEGDAESKYLAGLGVARQRQAIVDGLRDSVLAFSENVPGTTSKDIMDMVLITQYFDTIKEIGASSKSNAVFIPHGPGAVQDVASHIRDGLLQGNATQCS* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0685 274 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 1 272 - -
Pvu2g0685 274 Gene3D Band 7 domain 44 164 IPR036013 -
Pvu2g0685 274 SMART PHB_4 5 164 IPR001107 -
Pvu2g0685 274 CDD SPFH_like_u4 10 265 - -
Pvu2g0685 274 PANTHER HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 2 1 272 - -
Pvu2g0685 274 SUPERFAMILY Band 7/SPFH domain 48 164 IPR036013 -
Pvu2g0685 274 Pfam SPFH domain / Band 7 family 9 175 IPR001107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0685 Pvu-Chr2 7799949 7802181 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0685 - - pvu:PHAVU_002G066100g 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1991 3 40507850 40511236 Pvu2g0685 2 7799949 7802181 ECH
Pvu2g0685 2 7799949 7802181 Pvu2g0685 2 7799949 7802181 ECH
Pvu3g0717 3 10268618 10269722 Pvu2g0685 2 7799949 7802181 PCT