Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1972 ATGGTTGGCGACAAGACGAAGAAATTGAAAATTGCAGAGAATTTGGAGGATACCATCGACGAAAAACTCATCCTCTCCATTGAGAAGTTGCAAGAGGTCCAGGACGAACTCGACAAGATCAATGAGGAGGCGAGTGATAAGGTCCTCGAAGTAGAGCAGAAGTTTAATGAGATAAGGAAGCCAGTTTACGATAAGCGAAATGAGATCATCGTCAAATCTATTCCTGATTTCTGGTTTACTGCTTTTATGAATCACCCTGCTCTTTGTGAACTTCTGAATTTAGAGGATCAAAAGATATTTAAGTATTTGGGTTCTCTCGAGGTTGAAGATAATAAAGATGTCAAATCTGGGTACTCAATCACCTTTAATTTCAATCCCAATCCCTATTTTGAGAATACAAAGCTTACGAAGACTTTTACCTTCTTTGAAGAAGGATCAACAAAGATAACTGCTACCCCCATTAAATGGAAAGAGGGCAAGGGATTACCCAATGGAGTCAATCATGACAAGAATGGGAAGCGGGGTCGTATTGATATCAGTTTCTTTACTTGGTTTAGTGACTCTGAACAGAAAGACGATACGGATGAAATTCATGATGAGGTTGCAGAGTTGATTAAGGAAGATTTATGGCCAAATCCACTCACTTACTTCAACAATGAGTTTGACGAAGAGGATTTTGATGATGAAGCCGATGATGAGGAAAAGGATGAAGAGGACCAAGAGGATGATGATGATGAGGAAAGCAATGACATTTGA 756 0.3942 MVGDKTKKLKIAENLEDTIDEKLILSIEKLQEVQDELDKINEEASDKVLEVEQKFNEIRKPVYDKRNEIIVKSIPDFWFTAFMNHPALCELLNLEDQKIFKYLGSLEVEDNKDVKSGYSITFNFNPNPYFENTKLTKTFTFFEEGSTKITATPIKWKEGKGLPNGVNHDKNGKRGRIDISFFTWFSDSEQKDDTDEIHDEVAELIKEDLWPNPLTYFNNEFDEEDFDDEADDEEKDEEDQEDDDDEESNDI* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1972 251 SUPERFAMILY NAP-like 13 218 IPR037231 -
Pvu3g1972 251 Coils Coil 23 54 - -
Pvu3g1972 251 Gene3D Nucleosome assembly protein 75 221 - -
Pvu3g1972 251 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 247 IPR002164 GO:0005634|GO:0006334
Pvu3g1972 251 Gene3D - 3 74 - -
Pvu3g1972 251 MobiDBLite consensus disorder prediction 220 251 - -
Pvu3g1972 251 Pfam Nucleosome assembly protein (NAP) 72 219 IPR002164 GO:0005634|GO:0006334
Pvu3g1972 251 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 247 - -
Pvu3g1972 251 MobiDBLite consensus disorder prediction 215 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1972 Pvu-Chr3 40288687 40292696 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1972 K11290 - gmx:100810307 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1972 3 40288687 40292696 Pvu9g1942 9 27854965 27859003 ECH
Pvu3g1972 3 40288687 40292696 Pvu3g1972 3 40288687 40292696 ECH
Pvu9g1942 9 27854965 27859003 Pvu3g1972 3 40288687 40292696 PCT