Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1684 ATGAGCTGGTCTGGAGGAGATTGGATGTGTGGTGTCTGCGAGCACATAAATTTCAAGAAGAGGGAAGCATGCCAGAGTTGTGGATACCCCAAGTATGGGGGACCTGACCCTTCAACCTACAGATATAACAGGACTGAGGCTTTGGCAGGGGACTGGTTTTGCAACTGTGGAGGTCACAACTATGCCAGTCGATCAAACTGCTACAGATGTGGTGCAATGAAAGATGATTATTCTTCAGGATATGGCAACAACTCTGGAGGATATGGATCTGACACTTTCCCCCCAGGATGGAAGAGTGGAGACTGGCTTTGCCCAAGACTTGGATGTGGAGTGCATAATTATGCTAGCAGGACAGAATGCTATAAATGCAAAATGCCAAGGGATTTTGGTGGTGCAGATTGA 402 0.4726 MSWSGGDWMCGVCEHINFKKREACQSCGYPKYGGPDPSTYRYNRTEALAGDWFCNCGGHNYASRSNCYRCGAMKDDYSSGYGNNSGGYGSDTFPPGWKSGDWLCPRLGCGVHNYASRTECYKCKMPRDFGGAD* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1684 133 SUPERFAMILY Ran binding protein zinc finger-like 3 34 IPR036443 -
Pvu3g1684 133 SUPERFAMILY Ran binding protein zinc finger-like 46 76 IPR036443 -
Pvu3g1684 133 ProSiteProfiles Zinc finger RanBP2 type profile. 4 33 IPR001876 -
Pvu3g1684 133 ProSitePatterns Zinc finger RanBP2-type signature. 8 27 IPR001876 -
Pvu3g1684 133 PANTHER ZINC FINGER PROTEIN 1 130 - -
Pvu3g1684 133 SMART zf_4 50 73 IPR001876 -
Pvu3g1684 133 SMART zf_4 6 30 IPR001876 -
Pvu3g1684 133 SMART zf_4 100 126 IPR001876 -
Pvu3g1684 133 Gene3D - 93 129 - -
Pvu3g1684 133 Gene3D - 1 35 - -
Pvu3g1684 133 Gene3D - 42 76 - -
Pvu3g1684 133 ProSiteProfiles Zinc finger RanBP2 type profile. 98 129 IPR001876 -
Pvu3g1684 133 PANTHER ZINC FINGER, RANBP2-TYPE-RELATED 1 130 - -
Pvu3g1684 133 SUPERFAMILY Ran binding protein zinc finger-like 92 129 IPR036443 -
Pvu3g1684 133 Pfam Zn-finger in Ran binding protein and others 6 32 IPR001876 -
Pvu3g1684 133 Pfam Zn-finger in Ran binding protein and others 98 126 IPR001876 -
Pvu3g1684 133 ProSitePatterns Zinc finger RanBP2-type signature. 102 123 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1684 Pvu-Chr3 37059192 37061512 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1684 - - gmx:100780120 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2047 9 29325261 29327088 Pvu3g1684 3 37059192 37061512 PCT