Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1415 ATGGCAAGTTATTTTAGATTTTCGAAAGCTTTGGTTATGCTAGGGTTAACCTTCGTAGTGCTCACACAGGCACAATCACAACCTTGGTCATTACTCCAAGCACCAAAAGACCTAACCCTGAAGCTTATTCGTGATCCTGTGACCCTTTCACTAGCCTCAACAGACTTTGGCCACATAGTTCATGACAACCCTTTTGCAATTTTTTCTCCATCGTCCATTAGTGACATCTCTCTGCTGATAAATTTCTCGAATTCTCTCCCCATCCCTTTCACCATAGCTCCTAGAGGGCAAGCACATTCGGTTAACGGACAAGCCATGACAAATGACGGGGTTGTGGTGAACATGACTGAGTTGAATGGGTTTAGAAACGGGTCTGGGATTGTAGTAGTGTCTGATGGCACTCCATATGCTGATGTGGGTGGAGAACAAATTTGGATTGATGTGTTGCATGCAACACTTGAGCACGGACTCACACCACTCTCTTGGACTGACTACTTGTTCTTATCGGTTGCTGGAACTCTCTCCAATGCAGGGATTAGTGGCCAATCCTTCAGGTTTGGTCCTCAGATTTCCAATGTTCATCAATTGGATGTTGTTACAGGGAAAGGAGACCTAGTGACATGTTCTTCGGAGAACAACTCAGAGTTATTTTATGCCGTCCTAGGAGGACTAGGTCAATTTGGAATTATAACTAGGGCAAGAATAGCTCTTGGACCTGCACCAACTAGGGTGAAGTGGCTCCGTTTGCTTTACAACAATTTCTCTGCTTTTTCTGCAGACCAAGAACACTTAATCTCGTTGAATGGAAGAAACGAGACCATTGCAGCTGATTATGTAGAAGGTTTCCTTCTGCTAAATCAGCCACCATTGGATCTTTCCTCTTTTCCAGCACCTGATCAACCTCGTATATCTTCCCTAGTAACACAATACGGCATCATCTATATCATAGAGCTTGTGAAATATTACGACAATAGTACTCAAGAACACATTGAAGAGGAAGTAGAACTTTTGGTGGAGGGGTTGAAGTTTGTTCCTACGTTTATGTTCGAAAAAGATGTATCATACGAAGAGTTCCTGAACAGAGTTCATTCTGACGAGCTTTTCTTAAGATCACAAGGACTTTGGGATGTCCCTCATCCTTGGATAAACCTCTTTGTTCCAGGATCTCGAATCTCAGATTTCAATGAAGGTGTGTTCAAGGGCATTATTCTGAAGCAAAATATAACTGCAGGAATTGCGATAATCTACCCCATGAATCGATCCAAGTGGAATGATAAGATGTCTGCAGTTACACCTAATGAAGATGTTTTCTATGCTGTGTCACTTCTTCATGCAACTGGGTTTGATAAAGTGGAGGAATTTCAAGCTCAAAACCAACAAATATTAGATTTCTGTGAGGATGCTG 1405 0.4228 MASYFRFSKALVMLGLTFVVLTQAQSQPWSLLQAPKDLTLKLIRDPVTLSLASTDFGHIVHDNPFAIFSPSSISDISLLINFSNSLPIPFTIAPRGQAHSVNGQAMTNDGVVVNMTELNGFRNGSGIVVVSDGTPYADVGGEQIWIDVLHATLEHGLTPLSWTDYLFLSVAGTLSNAGISGQSFRFGPQISNVHQLDVVTGKGDLVTCSSENNSELFYAVLGGLGQFGIITRARIALGPAPTRVKWLRLLYNNFSAFSADQEHLISLNGRNETIAADYVEGFLLLNQPPLDLSSFPAPDQPRISSLVTQYGIIYIIELVKYYDNSTQEHIEEEVELLVEGLKFVPTFMFEKDVSYEEFLNRVHSDELFLRSQGLWDVPHPWINLFVPGSRISDFNEGVFKGIILKQNITAGIAIIYPMNRSKWNDKMSAVTPNEDVFYAVSLLHATGFDKVEEFQAQNQQILDFCEDA 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1415 468 ProSiteProfiles PCMH-type FAD-binding domain profile. 60 240 IPR016166 GO:0071949
Pvu3g1415 468 PANTHER GULONOLACTONE OXIDASE 9 468 - -
Pvu3g1415 468 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 9 468 - -
Pvu3g1415 468 Gene3D - 115 242 IPR016169 -
Pvu3g1415 468 SUPERFAMILY FAD-binding/transporter-associated domain-like 42 239 IPR036318 GO:0050660
Pvu3g1415 468 Gene3D - 243 467 IPR016170 -
Pvu3g1415 468 Gene3D - 46 114 IPR016167 -
Pvu3g1415 468 SUPERFAMILY FAD-linked oxidases, C-terminal domain 241 468 IPR016164 GO:0003824|GO:0050660
Pvu3g1415 468 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 241 467 IPR015345 GO:0009690|GO:0019139|GO:0050660
Pvu3g1415 468 Pfam FAD binding domain 66 209 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1415 Pvu-Chr3 32821118 32824801 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1415 K00279 - gmx:100816815 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1415 3 32821118 32824801 Pvu9g2396 9 34223306 34229917 PCT