Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1381 ATGTCTAGAGTTGAAGGTGGTAAGAGGAGTGGCGAAGAGGAGAAGAATTTGCTATTAAAAGGTGTTGAAAGCGTAGACAAAGCTCTGTGCATAGAGAAAAGCTCTTCCACGAATTCAAAATCTTCCAAATCCCTGTTACTTGATCCCAAATCAAAGGCTAAAGATAGCAAAGAAGATAACTTACGCAAGGATAAGAAGTTCGTATGGAATTGGAAACCATTGAAGGCCCTTTCCCTCTCTCGCAGTAAGAAGTTCAATTGTAGTTTTTCTGTCCAAGTCCATGTGATTGAAGGGTTGCCTTTGAGTTTCAATGAAGAGAATCTAGGTAATGAGGGGAAAACAAGCAGTCTAGTGCATGACAAACCTGAAGTTTTTGTGTTTCAAGAAAACCTGGACACAGTTAAGCTAAATGATTATCCTTTACCTGATTCTGGAGTAGAAAATCTCGAAGACTGTGAAGGTAATGAATTTTCTGTTGTTGATAAGGGCATCGAATTTTCATCAGATGAACATGTTAAACTAGAGGGATGTATTGGAAAAGCTTTTATTGATGTCTACACAGTTGACAGTACTCGGACCCTTGATAATGCTGGTATTCAAGTATCTTTTCAAGACCATGATAATCAGGATTCCCTTGCTGAACTAAGTGATAATTGTAAGAAAAGTGTTGTGGTACATGACTTTTCTAACCTAAAGGATGACTTGCCGACGAAAGAACTTCTACTGCAAGAACTAGAATCAGCTTTAAATAGTGTCTCAGAGTTGGAGACAGCGGCAATGGATTCTCCTATAACCATGGAAGCCAAATCTGAATATAAGTTGAGAAAGACACAAAGCTTGGATGATGTTACAGAATCAGTTGCCAGTGAGTTTTTAAGTAAGCTTGGCATAGACCATAGTCCAAGGGGTTTGAGTTTTGAAGGTGAGACTGAGTCTCCAAGAGAGCTCCTTTTAAGACAATTTGAGAATGAAGTTCGTTCAGAGGGCTTCTCTTTGTTTGATTTTGACATGGGCAGTGATAATGAAGCAGATTGTGGTAATGGTTTTTCTTTTGGATCTGAGCATTGGAAGTTCTCCACGGCTATTAAGCCAGCATCCTCAATGCCAGATGTACATAAAGGGCATCTAATTGAGTTTGAGAATGTGAGGAACAAACAAAAGGTCAAGATGCTAGAAGACTTGGAAACAGAAGCCTTAATGCGTGAATGGGGCTTGAGTGAGAAGGCTTTTCAGCATTCTCCTAAAAAAGATTATAATAATGGCTTAGGAAGTCCAATATATTTTCTACCTGAAGAGACTCTACCATTACCTCCTCTAGCAGAGGGGTTAGGTCCTTTTCTTCAGACCGAAGATGGGGGCTTTCTACGGTCAATGAACCCCACACTCTTCAGGAATAGTAGAACTGGTGGAGCATTAATCATGCAGGTTTCCCACCCAATTGTGGTGCCCGCTGAAATGGGTTCTGGGATAATGGAGATTTTGCAGTATTTGGCTTCGGTGGGAATTGAAAAACTTTCCAAGCAGGCAAATAAGTTAATGCCTCTAGAAGATATCACAGGGAAGACAATGCAACAATTATCAAGGGAAGTCTTGGGGGGAACACACAGGCAATTACATTTGCAGCATAATTTGGTAACAGGACAGGATTCTACTTGTGCGCAAAGAGGCTTGACGGGAACACTATATGGTGGACTAATGTCTAATAAGTTCAGTTCAGATTCATATGGCAACCAGAGAGGCTCAGAGTTTGTTTCATTGGATGATCTTGCTCTATTAGCTATGGAAAAAATTGAAGCACTTTCACTAGAGGGTTTGAGAATACAATCTGGGATGTCAAATGAGGATGCACCATCAAATATCATTGCACAATCCTATGGGGATATTTCAGCTCTGCAAGGCAAGGGGGTTAGTATTAGGGGCTCCCTTGGCCTAGATGGAGCTGCTGCCATGCAATTGTTGGATATGAAAAACAGCAGCAGTGATGAATATGATGGTGTTGACGGCATAATGGCCCTATCATTAACTCTAGAAGAATGGATGAGGCTGGATTCTGGTGAGATTGATGAGGATATAGACAATATCAGTGAGCATACTTCCAAACTTCTTGCTGCCCATCATGCTAATTCTTTTGACTTGATTCGTGGGAAGAGTTCAAAGGGAGAGAGGAAAAGAGGCAGGAAATGTGGTTTGTTGGGAAACAAATTCATAGTAGCACTAATGGAGCAGCTTCGTGATCCTCTGAGAAACTATGAGCCTGTTGGGACACCAATGCTTGCTCTTATACAAGTCGAGAGAGTGTTCATCCCACCAAAGCAAGAGATTTATAAGCACTTGGGTGAGGCAGGGAACAACAATGACGATGAGTGTGAAATAGTAGCCAAGGTGGAGTTGAAGGCCATCAAAGAAGAGAAAAGTTCTGAAGATGAGGGTATTCCTCAATTCAAAATTACAGAAGTACATGTTGCAGGTCTGCAAAAAAGGAAGTTTTGGAGCACTTCGAGACGACGACAACAACAAGAACAATCTGGTTCCCGCTGGTTGATTGCTAATGGAATGGGGAAGAGCTTTAAGAATCCGGCACTGAAGTCAAATGTTGTAACAAAATCTAGTGCTCCAATAACTACCACAAACGTGCAACCGGGTGACTCATTGTGGAGCATATCATCTCGTATTTATGGTACACTAACAAGATGGAATTGGTAG 2703 0.4121 MSRVEGGKRSGEEEKNLLLKGVESVDKALCIEKSSSTNSKSSKSLLLDPKSKAKDSKEDNLRKDKKFVWNWKPLKALSLSRSKKFNCSFSVQVHVIEGLPLSFNEENLGNEGKTSSLVHDKPEVFVFQENLDTVKLNDYPLPDSGVENLEDCEGNEFSVVDKGIEFSSDEHVKLEGCIGKAFIDVYTVDSTRTLDNAGIQVSFQDHDNQDSLAELSDNCKKSVVVHDFSNLKDDLPTKELLLQELESALNSVSELETAAMDSPITMEAKSEYKLRKTQSLDDVTESVASEFLSKLGIDHSPRGLSFEGETESPRELLLRQFENEVRSEGFSLFDFDMGSDNEADCGNGFSFGSEHWKFSTAIKPASSMPDVHKGHLIEFENVRNKQKVKMLEDLETEALMREWGLSEKAFQHSPKKDYNNGLGSPIYFLPEETLPLPPLAEGLGPFLQTEDGGFLRSMNPTLFRNSRTGGALIMQVSHPIVVPAEMGSGIMEILQYLASVGIEKLSKQANKLMPLEDITGKTMQQLSREVLGGTHRQLHLQHNLVTGQDSTCAQRGLTGTLYGGLMSNKFSSDSYGNQRGSEFVSLDDLALLAMEKIEALSLEGLRIQSGMSNEDAPSNIIAQSYGDISALQGKGVSIRGSLGLDGAAAMQLLDMKNSSSDEYDGVDGIMALSLTLEEWMRLDSGEIDEDIDNISEHTSKLLAAHHANSFDLIRGKSSKGERKRGRKCGLLGNKFIVALMEQLRDPLRNYEPVGTPMLALIQVERVFIPPKQEIYKHLGEAGNNNDDECEIVAKVELKAIKEEKSSEDEGIPQFKITEVHVAGLQKRKFWSTSRRRQQQEQSGSRWLIANGMGKSFKNPALKSNVVTKSSAPITTTNVQPGDSLWSISSRIYGTLTRWNW* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1381 900 Coils Coil 238 258 - -
Pvu3g1381 900 MobiDBLite consensus disorder prediction 34 58 - -
Pvu3g1381 900 CDD LysM 878 899 IPR018392 -
Pvu3g1381 900 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 111 899 IPR039614 -
Pvu3g1381 900 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 1 107 IPR039614 -
Pvu3g1381 900 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 111 899 - -
Pvu3g1381 900 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1381 Pvu-Chr3 32404535 32408477 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1381 - - pvu:PHAVU_003G133300g 1719.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1381 3 32404535 32408477 Pvu3g1381 3 32404535 32408477 ECH
Pvu3g1381 3 32404535 32408477 Pvu9g2370 9 33876951 33881454 PCT