Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1233 ATGAGGAAGTGGTATGGAGGCCTGTTGATAATAGCTTTGGGTATGATGTTGTTTTTCCTCTACAACCTAAAAGGAATTCAGCCACAGAAGCAGTCAGCAAAACAATCAGCCTACAATTTCTTTAATAACCATACACCAGATGATTCTATCAAACAAAGCAGCAATCTTTCAGTAAACTCTTCCGAGATGGAACTAAAAAGGGTACCGAAACCAACAAGAAGGCCACATTTGGTACATGTTGCAGGGCTTAATGATCTGTATGGCATGAAAAATTTATCCAAAGGAGATATGGATTCTGTGCTTATTTGGGATTCCTTACGTACCTTGCTGTCAAGGTCAGATGCTTTGGATGAAACGGCTCAAGGAATTAAAGAGGCTTCTGTAGCATGGAAAGAGTTGCTGTCCACCATTGAAAAGGACAAAGCTTCTAAGGTTAATAGGATGGATGGCCCTGAAAATCAAAACTGCCCATTCTCTGTGACCTCACCTGGTAAGGCTGAACTAGATAGTGGAATCACTCTTGATCTCCCCTGTGGTCTGGTTGTAGATTCTTCTATTACACTGATTGGAATCCCCAATGGACAAAACAGAAGCTTCCAGATTGGCCTTGCTGGGCAAGAGCTAGAAGGGGAGCCAAATCCTCCAGTTATCTTGCATTATAATGTGAGTCTTCCAGGAGAAAACATGACAGAGGAACCATATATTGTTCAAAATACATGGACTAGTGATTTAGGGTGGGGAAAAGAGGAAAGGTGTCCTGCACATGGGTCTGCCAACATCCAAGAAGTTGATGGACTTGTTCTCTGCAATGTGCAAGCAGTCAGAAGTAACACCAAAGGGAATGGAAATTTTGGTCAACCTGCTAGTGTACCTTCTAATATTTCCTCAGAAAGTGCACATAGAAATGCTATTTTCCCTTTTTCTGAGGGTAATGCTTTCACTTCCACGTTGTGGGTTGGTTCAGAGGGATTTCATATGACTGTGAATGGAAGGCATGAAACATCTTTTGCATATAGGGAGAACCTTGAACCGTGGTTAGTCAGCAGTATTAAAGTAGCAGGCAGTTTAAGTCTCTTATCAATCCTGGCTAAAGGTTTACCTGTTACTGAAGATAATGATATAGTTGTTGATGTTGAGAATCTGAAGGCTCCTTCAATCCCCAAAAAAAGGCTTATTTTGTTAATTGGAGTATTCTCTACTGGAAACAACTTTGAGCGTCGCATGGCCCTGAGGAGGTCTTGGATGCAATATGAGGCTGTACGTTCTGGAGAAGTTGCTGTCCGATTTTTCATTGGGCTTCACAAGAACAATAGGGTTAATTTTGAGTTATGGACTGAAGCTCAAGCATATGGAGATATTCAATTAATGCCTTTTGTAGATTACTATAGTTTGATTTCTTTGAAGACAATTGCAATTTGCATTATGGGGACAAAAATCATCCCTTCTAAATACATAATGAAAACAGATGATGATGCCTTTGTTAGGATTGATGAAGTGCTTTCGAGCCTTAAAGAAAAGCCATCCAAAGGCCTCTTATACGGTCTCATATCTTCTAAATCATCTCCTCAGAGGGATGAAGGCAGCAAGTGGTACATCAGTGAGGAGGAATGGCCACATGATACATACCCACTATGGGCACATGGTCCTGGCTATGTTATCTCTCGAGACATAGCAAAATTCATTGTCAATGGCCACCAAGAGAGAAAGCTCAAGCTCTTTAAACTGGAAGATGTTGCGATGGGCATATGGATTGAACAGTTCGCAAATGGTGGGAAAGAAGTGCGTTATATGAATGATGAGAGGTTTTATAATGCCGGATGTGAATCAAATTATGTCCTTGCCCACTATCAAAGCCCAAGGATGGTGCTTTGCCTTTGGGAGAAATTGCAGAAAGAACGCCAACCACTATGCTGTGAGTAG 1920 0.4135 MRKWYGGLLIIALGMMLFFLYNLKGIQPQKQSAKQSAYNFFNNHTPDDSIKQSSNLSVNSSEMELKRVPKPTRRPHLVHVAGLNDLYGMKNLSKGDMDSVLIWDSLRTLLSRSDALDETAQGIKEASVAWKELLSTIEKDKASKVNRMDGPENQNCPFSVTSPGKAELDSGITLDLPCGLVVDSSITLIGIPNGQNRSFQIGLAGQELEGEPNPPVILHYNVSLPGENMTEEPYIVQNTWTSDLGWGKEERCPAHGSANIQEVDGLVLCNVQAVRSNTKGNGNFGQPASVPSNISSESAHRNAIFPFSEGNAFTSTLWVGSEGFHMTVNGRHETSFAYRENLEPWLVSSIKVAGSLSLLSILAKGLPVTEDNDIVVDVENLKAPSIPKKRLILLIGVFSTGNNFERRMALRRSWMQYEAVRSGEVAVRFFIGLHKNNRVNFELWTEAQAYGDIQLMPFVDYYSLISLKTIAICIMGTKIIPSKYIMKTDDDAFVRIDEVLSSLKEKPSKGLLYGLISSKSSPQRDEGSKWYISEEEWPHDTYPLWAHGPGYVISRDIAKFIVNGHQERKLKLFKLEDVAMGIWIEQFANGGKEVRYMNDERFYNAGCESNYVLAHYQSPRMVLCLWEKLQKERQPLCCE* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1233 639 PANTHER - 74 630 - -
Pvu3g1233 639 MobiDBLite consensus disorder prediction 44 70 - -
Pvu3g1233 639 SMART Gal_bind_lectin_2 176 363 IPR001079 GO:0030246
Pvu3g1233 639 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 74 630 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pvu3g1233 639 CDD GLECT 173 361 IPR001079 GO:0030246
Pvu3g1233 639 Pfam Galactosyltransferase 405 586 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pvu3g1233 639 SUPERFAMILY Concanavalin A-like lectins/glucanases 173 364 IPR013320 -
Pvu3g1233 639 MobiDBLite consensus disorder prediction 44 62 - -
Pvu3g1233 639 Pfam Galactoside-binding lectin 173 362 IPR001079 GO:0030246
Pvu3g1233 639 Gene3D - 387 616 - -
Pvu3g1233 639 Gene3D - 170 362 - -
Pvu3g1233 639 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 172 364 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1233 Pvu-Chr3 29620631 29628465 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1233 1 639 Glycosyltransferase AT3G06440 51.246 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1233 K20843 - gmx:100816729 1154.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1233 3 29620631 29628465 Pvu3g1233 3 29620631 29628465 ECH
Pvu3g1233 3 29620631 29628465 Pvu2g0872 2 13180142 13185778 PCT